RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 MAML3Q96JK9 1138 aa18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 IL17RBQ9NRM6 502 aa18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 SLC5A4Q9NY91 659 aa18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 STX8Q9UNK0 236 aa18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 CTDP1Q9Y5B0 961 aaPredicted RBP18.47■□□□□ 0.55
PPFIA4-208ENST00000597023 PLIN4Q96Q06 1357 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 ZBED4O75132 1171 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 BMP3P12645 472 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 MCCP23508 829 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 KCTD2Q14681 263 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 ALX1Q15699 326 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.55
PPFIA4-208ENST00000597023 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
PPFIA4-208ENST00000597023 SYN1P17600 705 aa18.45■□□□□ 0.54
PPFIA4-208ENST00000597023 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
PPFIA4-208ENST00000597023 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
PPFIA4-208ENST00000597023 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
PPFIA4-208ENST00000597023 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 SNAP25P60880 206 aa18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 ZNF792Q3KQV3 632 aa18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 GJC2Q5T442 439 aaPredicted RBP18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 TEX13BQ9BXU2 312 aa18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 SENP6Q9GZR1 1112 aaPredicted RBP18.44■□□□□ 0.54
PPFIA4-208ENST00000597023 COL6A1P12109 1028 aa18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 TAL1P17542 331 aaPredicted RBP18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 SLC1A4P43007 532 aa18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 LRRC26Q2I0M4 334 aa18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 COL11A1P12107 1806 aaPredicted RBP18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 PARP14Q460N5 1801 aa18.43■□□□□ 0.54
PPFIA4-208ENST00000597023 ORC4O43929 436 aa18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 PDE4AP27815 886 aa18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 HOMER2Q9NSB8 354 aa18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 SYNPO2Q9UMS6 1093 aa18.42■□□□□ 0.54
PPFIA4-208ENST00000597023 SEPT4O43236 478 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 MSCO60682 206 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 FGRP09769 529 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 COPB2P35606 906 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 TBC1D10CQ8IV04 446 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 STAG1Q8WVM7 1258 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 AGBL1Q96MI9 1066 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 TINF2Q9BSI4 451 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
PPFIA4-208ENST00000597023 ZNF236Q9UL36 1845 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 ATP2A1O14983 1001 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 STAT2P52630 851 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 RCSD1Q6JBY9 416 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 CHURC1Q8WUH1 139 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 PRO3102Q9H379 93 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 MYH4Q9Y623 1939 aa18.4■□□□□ 0.54
PPFIA4-208ENST00000597023 PPP4R3BQ5MIZ7 849 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 AKNAD1Q5T1N1 836 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 TTBK2Q6IQ55 1244 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 LENG1Q96BZ8 264 aaPredicted RBP18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 TMEM47Q9BQJ4 181 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 DIS3Q9Y2L1 958 aaKnown RBP18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 ALPK3Q96L96 1907 aa18.39■□□□□ 0.53
PPFIA4-208ENST00000597023 DNM1LO00429 736 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 SLC16A2P36021 539 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 ARRDC4Q8NCT1 418 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 ZNF536O15090 1300 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 NEDD4P46934 1319 aa18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
PPFIA4-208ENST00000597023 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 ZNF213O14771 459 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 SNAI1O95863 264 aaPredicted RBP18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 ZNF865P0CJ78 1059 aaPredicted RBP18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 ALAS1P13196 640 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 NOVP48745 357 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 FERMT2Q96AC1 680 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 IL25Q9H293 177 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 GPCPD1Q9NPB8 672 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 ZMYM6O95789 1325 aa18.37■□□□□ 0.53
PPFIA4-208ENST00000597023 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 PGK1P00558 417 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 ADCYAP1R1P41586 468 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 OAZ1P54368 228 aa18.36■□□□□ 0.53
PPFIA4-208ENST00000597023 LRRC41Q15345 812 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms