RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 CCND3P30281 292 aaPredicted RBP26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 DPP9Q86TI2 863 aa26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 KIFC2Q96AC6 838 aa26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 RIPK3Q9Y572 518 aa26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 RAD50Q92878 1312 aa26.37■■□□□ 1.81
GTF2F1-204ENST00000594965 ALPK3Q96L96 1907 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 TMEM232C9JQI7 657 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 ATP2A1O14983 1001 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 SLC1A4P43007 532 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 RCSD1Q6JBY9 416 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 TMEM47Q9BQJ4 181 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 RNF41Q9H4P4 317 aaPredicted RBP26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 SLC38A10Q9HBR0 1119 aa26.36■■□□□ 1.81
GTF2F1-204ENST00000594965 SMCHD1A6NHR9 2005 aa26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 FARP2O94887 1054 aaPredicted RBP26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 FCER1AP12319 257 aa26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 SNRNP48Q6IEG0 339 aaKnown RBP26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 KCTD1Q719H9 257 aa26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 TEX13BQ9BXU2 312 aa26.35■■□□□ 1.81
GTF2F1-204ENST00000594965 ZBED4O75132 1171 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 CAPN2P17655 700 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 PRPF38BQ5VTL8 546 aaKnown RBP26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 MFSD14CQ5VZR4 134 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 OLFML2BQ68BL8 750 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 SKAP1Q86WV1 359 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 MMP19Q99542 508 aa26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 RAVER2Q9HCJ3 691 aaKnown RBP26.34■■□□□ 1.81
GTF2F1-204ENST00000594965 PLA2G6O60733 806 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 TOP1P11387 765 aaKnown RBP26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 CYP2C19P33261 490 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 COPB2P35606 906 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 MNX1P50219 401 aaPredicted RBP26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 STAT2P52630 851 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 CENPQQ7L2Z9 268 aaPredicted RBP26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 CPXCR1Q8N123 301 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 TRPV1Q8NER1 839 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 ESR2Q92731 530 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 CTNNA3Q9UI47 895 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 OGDHLQ9ULD0 1010 aa26.33■■□□□ 1.81
GTF2F1-204ENST00000594965 PTH1RQ03431 593 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 IMMTQ16891 758 aaKnown RBP26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 LHX8Q68G74 356 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 FAM160B2Q86V87 743 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 CHURC1Q8WUH1 139 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 ZKSCAN3Q9BRR0 538 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 MTMR7Q9Y216 660 aa26.32■■□□□ 1.8
GTF2F1-204ENST00000594965 PGK2P07205 417 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 OAZ1P54368 228 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 DIS3LQ8TF46 1054 aaKnown RBP26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 DCAF4Q8WV16 495 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 RUFY2Q8WXA3 655 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 MAML3Q96JK9 1138 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 TTC14Q96N46 770 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 SLC5A4Q9NY91 659 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 ISY1Q9ULR0 285 aaKnown RBP26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 ZNF536O15090 1300 aa26.31■■□□□ 1.8
GTF2F1-204ENST00000594965 B4E1Z4 1266 aa26.3■■□□□ 1.8
GTF2F1-204ENST00000594965 SGSM2O43147 1006 aa26.3■■□□□ 1.8
GTF2F1-204ENST00000594965 KDM4AO75164 1064 aa26.3■■□□□ 1.8
GTF2F1-204ENST00000594965 CYBAP13498 195 aa26.3■■□□□ 1.8
GTF2F1-204ENST00000594965 ZNF792Q3KQV3 632 aa26.3■■□□□ 1.8
GTF2F1-204ENST00000594965 FDX1P10109 184 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 SLC4A3P48751 1232 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 KCTD2Q14681 263 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 TTBK2Q6IQ55 1244 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 ANKLE1Q8NAG6 615 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 PAWRQ96IZ0 340 aaKnown RBP26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 PRR12Q9ULL5 1215 aa26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 CTDP1Q9Y5B0 961 aaPredicted RBP26.29■■□□□ 1.8
GTF2F1-204ENST00000594965 PDHBP11177 359 aa26.28■■□□□ 1.8
GTF2F1-204ENST00000594965 NT5C2P49902 561 aa26.28■■□□□ 1.8
GTF2F1-204ENST00000594965 CCDC96Q2M329 555 aa26.28■■□□□ 1.8
GTF2F1-204ENST00000594965 ZSWIM5Q9P217 1185 aa26.28■■□□□ 1.8
GTF2F1-204ENST00000594965 DIS3Q9Y2L1 958 aaKnown RBP26.28■■□□□ 1.8
GTF2F1-204ENST00000594965 MCM3APO60318 1980 aa26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 SNAP25P60880 206 aa26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 IKQ13123 557 aaPredicted RBP26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 BTNL9Q6UXG8 535 aa26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 DGKHQ86XP1 1220 aa26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 AGBL1Q96MI9 1066 aa26.27■■□□□ 1.8
GTF2F1-204ENST00000594965 FRMPD2Q68DX3 1309 aaPredicted RBP26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 DNAJC25-GNG10A0A024R161 153 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 SNHG28P0DPA3 235 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 PRAMEF19Q5SWL8 479 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 CHST13Q8NET6 341 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 ANKS1AQ92625 1134 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 DDX20Q9UHI6 824 aaKnown RBP26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 LCTP09848 1927 aa26.26■■□□□ 1.79
GTF2F1-204ENST00000594965 CYP21A2P08686 494 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 SLC16A2P36021 539 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 NECAB2Q7Z6G3 386 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 IQCA1Q86XH1 822 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 KRT23Q9C075 422 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 GPCPD1Q9NPB8 672 aa26.25■■□□□ 1.79
GTF2F1-204ENST00000594965 CNGA1P29973 690 aa26.24■■□□□ 1.79
GTF2F1-204ENST00000594965 ZNF543Q08ER8 600 aa26.24■■□□□ 1.79
GTF2F1-204ENST00000594965 ZSCAN10Q96SZ4 725 aaPredicted RBP26.24■■□□□ 1.79
GTF2F1-204ENST00000594965 TINF2Q9BSI4 451 aa26.24■■□□□ 1.79
GTF2F1-204ENST00000594965 HTATIP2Q9BUP3 242 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms