RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	KIFC2	Q96AC6	838 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	TTC14	Q96N46	770 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	SLC38A10	Q9HBR0	1119 aa		20.41	■□□□□ 0.86
MBD1-221	ENST00000589867		U3KPZ7	1027 aa	Predicted RBP	20.41	■□□□□ 0.86
MBD1-221	ENST00000589867	ATP2A1	O14983	1001 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	HMGCR	P04035	888 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	SNHG28	P0DPA3	235 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	RGS2	P41220	211 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	SLC1A4	P43007	532 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	CCAR1	Q8IX12	1150 aa	Known RBP	20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	APBA2	Q99767	749 aa		20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	BIN2	Q9UBW5	565 aa	Predicted RBP	20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	RBM8A	Q9Y5S9	174 aa	Known RBP	20.4	■□□□□ 0.86
MBD1-221	ENST00000589867	ZNF536	O15090	1300 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	GJB1	P08034	283 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	PDHB	P11177	359 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	ADORA2A	P29274	412 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	UBXN2A	P68543	259 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	NCAPG2	Q86XI2	1143 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	ENAH	Q8N8S7	591 aa	Predicted RBP	20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	DCAF4	Q8WV16	495 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	TMEM106C	Q9BVX2	250 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	MROH8	Q9H579	483 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	PAK6	Q9NQU5	681 aa	Predicted RBP	20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	MTMR7	Q9Y216	660 aa		20.39	■□□□□ 0.85
MBD1-221	ENST00000589867	SLC25A27	O95847	323 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	CENPB	P07199	599 aa	Predicted RBP	20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	NT5C2	P49902	561 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	STAT2	P52630	851 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	MLLT1	Q03111	559 aa	Predicted RBP	20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	SEC23A	Q15436	765 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	ERICH6B	Q5W0A0	696 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	BTNL9	Q6UXG8	535 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	DGKH	Q86XP1	1220 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	TEX13B	Q9BXU2	312 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	RNF208	Q9H0X6	261 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	RAVER2	Q9HCJ3	691 aa	Known RBP	20.38	■□□□□ 0.85
MBD1-221	ENST00000589867	PPP4R2	Q9NY27	417 aa		20.38	■□□□□ 0.85
MBD1-221	ENST00000589867		E7EWF7	191 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	STRN	O43815	780 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	GJA8	P48165	433 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	SNAP25	P60880	206 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	CACNB2	Q08289	660 aa	Predicted RBP	20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	SNRNP48	Q6IEG0	339 aa	Known RBP	20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	FAM160B2	Q86V87	743 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	ABRA	Q8N0Z2	381 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	CPXCR1	Q8N123	301 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	KRT23	Q9C075	422 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	PRR12	Q9ULL5	1215 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	PLXNA1	Q9UIW2	1896 aa		20.37	■□□□□ 0.85
MBD1-221	ENST00000589867	TNKS	O95271	1327 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	FRMPD2	Q68DX3	1309 aa	Predicted RBP	20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	ZKSCAN1	P17029	563 aa	Predicted RBP	20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	TAL1	P17542	331 aa	Predicted RBP	20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	SLC16A2	P36021	539 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	ZNF543	Q08ER8	600 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	NECTIN1	Q15223	517 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	CHURC1	Q8WUH1	139 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	CNNM2	Q9H8M5	875 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	SENP2	Q9HC62	589 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	CWC22	Q9HCG8	908 aa	Known RBP	20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	IVNS1ABP	Q9Y6Y0	642 aa		20.36	■□□□□ 0.85
MBD1-221	ENST00000589867	ZBED4	O75132	1171 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	PRKAR2A	P13861	404 aa	Known RBP	20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	ANTXR2	P58335	489 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	UBE2Q1	Q7Z7E8	422 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	IQCA1	Q86XH1	822 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	U2AF1L4	Q8WU68	220 aa	Known RBP	20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	CRISPLD2	Q9H0B8	497 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	GPCPD1	Q9NPB8	672 aa		20.35	■□□□□ 0.85
MBD1-221	ENST00000589867	RPTOR	Q8N122	1335 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	SLC27A2	O14975	620 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	CDC45	O75419	566 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	PGK2	P07205	417 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	FCER1A	P12319	257 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	CCND3	P30281	292 aa	Predicted RBP	20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	OAZ1	P54368	228 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	CCDC96	Q2M329	555 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	ZNF792	Q3KQV3	632 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	MB21D2	Q8IYB1	491 aa	Predicted RBP	20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	TRMT44	Q8IYL2	757 aa	Known RBP	20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	TRPV1	Q8NER1	839 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	AGBL1	Q96MI9	1066 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	DEFB118	Q96PH6	123 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	MMP19	Q99542	508 aa		20.34	■□□□□ 0.85
MBD1-221	ENST00000589867	DNAJC25-GNG10	A0A024R161	153 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	SGPL1	O95470	568 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	FDX1	P10109	184 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	CYP2C19	P33261	490 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	OLFML2B	Q68BL8	750 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	PNMA1	Q8ND90	353 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	FGD4	Q96M96	766 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	RANBP17	Q9H2T7	1088 aa	Known RBP	20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	CPVL	Q9H3G5	476 aa		20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	ISY1	Q9ULR0	285 aa	Known RBP	20.33	■□□□□ 0.85
MBD1-221	ENST00000589867	GOLGA8H	P0CJ92	632 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	COPB2	P35606	906 aa		20.32	■□□□□ 0.84

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