RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 FOXP2O15409 715 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 PRDM1O75626 825 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 HOXD10P28358 340 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 ALX1Q15699 326 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
SDF2-208ENST00000589788 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 HPS5Q9UPZ3 1129 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
SDF2-208ENST00000589788 MGAMO43451 1857 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 EEF2P13639 858 aaKnown RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 VCAM1P19320 739 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 HERVK_113P62684 666 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 CAP1Q01518 475 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 FAM110CQ1W6H9 321 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 LPAR1Q92633 364 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 P2RX7Q99572 595 aaKnown RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 TANGO6Q9C0B7 1094 aa12.3□□□□□ -0.44
SDF2-208ENST00000589788 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
SDF2-208ENST00000589788 TNPO2O14787 897 aaKnown RBP12.29□□□□□ -0.44
SDF2-208ENST00000589788 SPTLC1O15269 473 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 RAD21O60216 631 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 FGAP02671 866 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 TSPY3P0CV98 308 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 TSPY8P0CW00 308 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 PRMT2P55345 433 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
SDF2-208ENST00000589788 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
SDF2-208ENST00000589788 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 VCPKMTQ9H867 229 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
SDF2-208ENST00000589788 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
SDF2-208ENST00000589788 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 TFAP4Q01664 338 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
SDF2-208ENST00000589788 SPICE1Q8N0Z3 855 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 GPRC5AQ8NFJ5 357 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 COA7Q96BR5 231 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 SRRDQ9UH36 339 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 ZMYM6O95789 1325 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 MYH4Q9Y623 1939 aa12.28□□□□□ -0.44
SDF2-208ENST00000589788 TSPY2A6NKD2 308 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 WDR46O15213 610 aaKnown RBP12.27□□□□□ -0.45
SDF2-208ENST00000589788 RANBP6O60518 1105 aaKnown RBP12.27□□□□□ -0.45
SDF2-208ENST00000589788 CTGFP29279 349 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 HAND2P61296 217 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 COG2Q14746 738 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 SLC9C1Q4G0N8 1177 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
SDF2-208ENST00000589788 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 RAET1EQ8TD07 263 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 MORF4L1Q9UBU8 362 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.45
SDF2-208ENST00000589788 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 RAD50Q92878 1312 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 TTLL1O95922 423 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 CHMLP26374 656 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 RDH13Q8NBN7 331 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 CEP95Q96GE4 821 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 DSCC1Q9BVC3 393 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
SDF2-208ENST00000589788 TXNRD2Q9NNW7 524 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 INCENPQ9NQS7 918 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 MTMR4Q9NYA4 1195 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 HOXC10Q9NYD6 342 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 RBPJLQ9UBG7 517 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
SDF2-208ENST00000589788 RABGAP1Q9Y3P9 1069 aa12.26□□□□□ -0.45
SDF2-208ENST00000589788 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 ZNF213O14771 459 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 ORC4O43929 436 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 PEX10O60683 326 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 FLOT1O75955 427 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
SDF2-208ENST00000589788 RFC5P40937 340 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
SDF2-208ENST00000589788 ERVK-24P63145 666 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms