RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 AK8Q96MA6 479 aa11.83□□□□□ -0.52
VPS25-203ENST00000589520 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
VPS25-203ENST00000589520 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
VPS25-203ENST00000589520 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
VPS25-203ENST00000589520 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
VPS25-203ENST00000589520 MYH1P12882 1939 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 ECM29Q5VYK3 1845 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
VPS25-203ENST00000589520 MYL1P05976 194 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 POLD1P28340 1107 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 PRELPP51888 382 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 NFIAQ12857 509 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 TRAF1Q13077 416 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS25-203ENST00000589520 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
VPS25-203ENST00000589520 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
VPS25-203ENST00000589520 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 GTPBP4Q9BZE4 634 aaKnown RBP11.82□□□□□ -0.52
VPS25-203ENST00000589520 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
VPS25-203ENST00000589520 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
VPS25-203ENST00000589520 CBFA2T2O43439 604 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 HSPA6P17066 643 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 SH3RF1Q7Z6J0 888 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
VPS25-203ENST00000589520 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 SPATA20Q8TB22 786 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
VPS25-203ENST00000589520 PDGFDQ9GZP0 370 aaPredicted RBP11.81□□□□□ -0.52
VPS25-203ENST00000589520 MAGEF1Q9HAY2 307 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 PCDHA5Q9Y5H7 936 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 MYH6P13533 1939 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
VPS25-203ENST00000589520 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 ZBTB5O15062 677 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 TBC1D12O60347 775 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 DPEP1P16444 411 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 KCNA3P22001 575 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 MCM7P33993 719 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 DLGAP5Q15398 846 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 DPCR1Q3MIW9 517 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 C4orf32Q8N8J7 132 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 FAM151AQ8WW52 585 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
VPS25-203ENST00000589520 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 PIGSQ96S52 555 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 GMLQ99445 158 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 CUEDC2Q9H467 287 aa11.8□□□□□ -0.52
VPS25-203ENST00000589520 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
VPS25-203ENST00000589520 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
VPS25-203ENST00000589520 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 AP5Z1O43299 807 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 VEGFAP15692 232 aaPredicted RBP11.79□□□□□ -0.52
VPS25-203ENST00000589520 ADCY7P51828 1080 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 GSDMDP57764 484 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 MYL5Q02045 173 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 PNOCQ13519 176 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 MORC3Q14149 939 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.79□□□□□ -0.52
VPS25-203ENST00000589520 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
VPS25-203ENST00000589520 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
VPS25-203ENST00000589520 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 PAGE5Q96GU1 130 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 VAT1LQ9HCJ6 419 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 RMND1Q9NWS8 449 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
VPS25-203ENST00000589520 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS25-203ENST00000589520 SLC26A4O43511 780 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms