RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 BTNL9Q6UXG8 535 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 BRF1Q92994 677 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 R3HDMLQ9H3Y0 253 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 SENP2Q9HC62 589 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 PPP1R9AQ9ULJ8 1098 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 CTDP1Q9Y5B0 961 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-220ENST00000588917 ZBTB43O43298 467 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 ZBED4O75132 1171 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 GNAQP50148 359 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 FBXO46Q6PJ61 603 aaPredicted RBP22.82■■□□□ 1.24
CIRBP-220ENST00000588917 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 NUP133Q8WUM0 1156 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 GPCPD1Q9NPB8 672 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 ADAMTS5Q9UNA0 930 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 RABGAP1Q9Y3P9 1069 aa22.82■■□□□ 1.24
CIRBP-220ENST00000588917 KLF18A0A0U1RQI7 1052 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 PALM3A6NDB9 673 aaPredicted RBP22.81■■□□□ 1.24
CIRBP-220ENST00000588917 EVCP57679 992 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 GRM4Q14833 912 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 RABEP1Q15276 862 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 APOA5Q6Q788 366 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 FANCBQ8NB91 859 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 KIFC2Q96AC6 838 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 CHMP4CQ96CF2 233 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 LZTS2Q9BRK4 669 aa22.81■■□□□ 1.24
CIRBP-220ENST00000588917 SPDYE16A6NNV3 312 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-220ENST00000588917 GPRC5AQ8NFJ5 357 aa22.8■■□□□ 1.24
CIRBP-220ENST00000588917 ZNF274Q96GC6 653 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-220ENST00000588917 FBXO28Q9NVF7 368 aa22.8■■□□□ 1.24
CIRBP-220ENST00000588917 RBM28Q9NW13 759 aaKnown RBP22.8■■□□□ 1.24
CIRBP-220ENST00000588917 FRMPD2Q68DX3 1309 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-220ENST00000588917 CCDC196A0A1B0GTZ2 297 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 KLRF2D3W0D1 207 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 SMARCA1P28370 1054 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 APOBRQ0VD83 1088 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 FAM110CQ1W6H9 321 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 SAMD1Q6SPF0 538 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-220ENST00000588917 KIF2CQ99661 725 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 RBPJLQ9UBG7 517 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 MORF4L1Q9UBU8 362 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 MAD2L2Q9UI95 211 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 PNMA2Q9UL42 364 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 BRPF3Q9ULD4 1205 aa22.79■■□□□ 1.24
CIRBP-220ENST00000588917 NAP1L2Q9ULW6 460 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-220ENST00000588917 VWA5AO00534 786 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 GOLGA8HP0CJ92 632 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 CCNA1P78396 465 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 SP3Q02447 781 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 TOB2Q14106 344 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-220ENST00000588917 ARHGEF6Q15052 776 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 SYDE2Q5VT97 1194 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 PDE4DIPQ5VU43 2346 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 ANKRD13CQ8N6S4 541 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 ATG4CQ96DT6 458 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 CPA4Q9UI42 421 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 PRR12Q9ULL5 1215 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 ADGRA2Q96PE1 1338 aa22.78■■□□□ 1.24
CIRBP-220ENST00000588917 ST18O60284 1047 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 BCRP11274 1271 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 OAZ1P54368 228 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 KIF22Q14807 665 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 TTBK2Q6IQ55 1244 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 MICU3Q86XE3 530 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 SLC38A10Q9HBR0 1119 aa22.77■■□□□ 1.24
CIRBP-220ENST00000588917 SLC16A2P36021 539 aa22.76■■□□□ 1.23
CIRBP-220ENST00000588917 METAP2P50579 478 aaKnown RBP eCLIP22.76■■□□□ 1.23
CIRBP-220ENST00000588917 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
CIRBP-220ENST00000588917 STAG2Q8N3U4 1231 aa22.76■■□□□ 1.23
CIRBP-220ENST00000588917 PAGR1Q9BTK6 254 aa22.76■■□□□ 1.23
CIRBP-220ENST00000588917 MYL10Q9BUA6 226 aa22.76■■□□□ 1.23
CIRBP-220ENST00000588917 UBA5Q9GZZ9 404 aa22.76■■□□□ 1.23
CIRBP-220ENST00000588917 GOLGA8AA7E2F4 631 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 GOLGA8BA8MQT2 603 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 ATP2A1O14983 1001 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 DHX16O60231 1041 aaKnown RBP22.75■■□□□ 1.23
CIRBP-220ENST00000588917 PDIA3P30101 505 aaKnown RBP22.75■■□□□ 1.23
CIRBP-220ENST00000588917 COPB2P35606 906 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 AK2P54819 239 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 ERVK-9P63128 1117 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 ERVK-24P63145 666 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 TRAF1Q13077 416 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 RTN1Q16799 776 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 RASGRP2Q7LDG7 609 aa22.75■■□□□ 1.23
CIRBP-220ENST00000588917 SLC25A27O95847 323 aa22.74■■□□□ 1.23
CIRBP-220ENST00000588917 ADGRF4Q8IZF3 695 aa22.74■■□□□ 1.23
CIRBP-220ENST00000588917 ERO1AQ96HE7 468 aa22.74■■□□□ 1.23
CIRBP-220ENST00000588917 SPATC1LQ9H0A9 340 aa22.74■■□□□ 1.23
CIRBP-220ENST00000588917 BTBD7Q9P203 1132 aa22.74■■□□□ 1.23
CIRBP-220ENST00000588917 STAT3P40763 770 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 PLS1Q14651 629 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 TMEM132BQ14DG7 1078 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 CCDC144CPQ8IYA2 1237 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 RANBP17Q9H2T7 1088 aaKnown RBP22.73■■□□□ 1.23
CIRBP-220ENST00000588917 RIOX1Q9H6W3 641 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 VAT1LQ9HCJ6 419 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 TXNRD2Q9NNW7 524 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 TRIM17Q9Y577 477 aa22.73■■□□□ 1.23
CIRBP-220ENST00000588917 CNMDO75829 334 aa22.72■■□□□ 1.23
CIRBP-220ENST00000588917 RXRAP19793 462 aa22.72■■□□□ 1.23
CIRBP-220ENST00000588917 MAPK4P31152 587 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms