RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RALYLQ86SE5 291 aaKnown RBP11.62□□□□□ -0.55
GGA3-209ENST00000580646 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
GGA3-209ENST00000580646 MB21D1Q8N884 522 aa11.62□□□□□ -0.55
GGA3-209ENST00000580646 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
GGA3-209ENST00000580646 TRIB2Q92519 343 aa11.62□□□□□ -0.55
GGA3-209ENST00000580646 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.62□□□□□ -0.55
GGA3-209ENST00000580646 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
GGA3-209ENST00000580646 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 UBE2Q1Q7Z7E8 422 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 UBE2Q2Q8WVN8 375 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 ATG4CQ96DT6 458 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 IL17RAQ96F46 866 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 ZSCAN10Q96SZ4 725 aaPredicted RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 MOV10L1Q9BXT6 1211 aaKnown RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 SPATC1LQ9H0A9 340 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
GGA3-209ENST00000580646 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
GGA3-209ENST00000580646 F5H6K3 240 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 RAD21O60216 631 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 FARP2O94887 1054 aaPredicted RBP11.6□□□□□ -0.55
GGA3-209ENST00000580646 TOP1P11387 765 aaKnown RBP11.6□□□□□ -0.55
GGA3-209ENST00000580646 MCM5P33992 734 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 ANAPC15P60006 121 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 KLRC3Q07444 240 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 SART3Q15020 963 aaKnown RBP11.6□□□□□ -0.55
GGA3-209ENST00000580646 CCL14Q16627 93 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 MAP3K21Q5TCX8 1036 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 SHCBP1Q8NEM2 672 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 NEK1Q96PY6 1258 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 APBA2Q99767 749 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 FBXO28Q9NVF7 368 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 STX8Q9UNK0 236 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 TNKSO95271 1327 aa11.6□□□□□ -0.55
GGA3-209ENST00000580646 MYH6P13533 1939 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 STRNO43815 780 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 NMT2O60551 498 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 HOXC6P09630 235 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
GGA3-209ENST00000580646 ERCC3P19447 782 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 CACNB2Q08289 660 aaPredicted RBP11.59□□□□□ -0.55
GGA3-209ENST00000580646 GRB14Q14449 540 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 PLS1Q14651 629 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 SEC23AQ15436 765 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 CYB5R4Q7L1T6 521 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 ENAHQ8N8S7 591 aaPredicted RBP11.59□□□□□ -0.55
GGA3-209ENST00000580646 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 TMEM47Q9BQJ4 181 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 TM6SF1Q9BZW5 370 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 MROH8Q9H579 483 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 ADAMTS5Q9UNA0 930 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
GGA3-209ENST00000580646 ERICH2A1L162 156 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 VWA5AO00534 786 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 DLL1O00548 723 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 PLA2G6O60733 806 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 NDUFB10O96000 172 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 PSMA5P28066 241 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 LIFRP42702 1097 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 ANTXR2P58335 489 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 MFSD14CQ5VZR4 134 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
GGA3-209ENST00000580646 DPP9Q86TI2 863 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 NCAPG2Q86XI2 1143 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 TMTC2Q8N394 836 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 FBXL16Q8N461 479 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 NPLOC4Q8TAT6 608 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 DCAF4Q8WV16 495 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 DPF3Q92784 378 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
GGA3-209ENST00000580646 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
GGA3-209ENST00000580646 IFIT3O14879 490 aaKnown RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 PRC1O43663 620 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 SLC25A27O95847 323 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 ADORA2AP29274 412 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 CCND3P30281 292 aaPredicted RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 STAT3P40763 770 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 IFIT1BQ5T764 474 aaKnown RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 LRRC47Q8N1G4 583 aaKnown RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 ANKLE1Q8NAG6 615 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 IGDCC4Q8TDY8 1250 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
GGA3-209ENST00000580646 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
GGA3-209ENST00000580646 ZKSCAN3Q9BRR0 538 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms