RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CHURC1Q8WUH1 139 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 SLC45A1Q9Y2W3 748 aa18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 COL11A1P12107 1806 aaPredicted RBP18.5■□□□□ 0.55
CSNK1D-212ENST00000580061 A0A0G2JMZ2 1700 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 FLOT1O75955 427 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 SLC16A2P36021 539 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 TM4SF4P48230 202 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 NTRK3Q16288 839 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 FAM43AQ8N2R8 423 aa18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-212ENST00000580061 PDHXO00330 501 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 IGF2BP3O00425 579 aaKnown RBP eCLIP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 CYTH3O43739 400 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 DHX16O60231 1041 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 OSBPP22059 807 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 FUT2Q10981 343 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 IKQ13123 557 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 COG2Q14746 738 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 SYDE2Q5VT97 1194 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 IFNL1Q8IU54 200 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 REM2Q8IYK8 340 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 PRPF38AQ8NAV1 312 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 SPZ1Q9BXG8 430 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 ASCC2Q9H1I8 757 aaPredicted RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 RIOX1Q9H6W3 641 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 ZCCHC17Q9NP64 241 aaKnown RBP18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 PRR12Q9ULL5 1215 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 MYPNQ86TC9 1320 aa18.48■□□□□ 0.55
CSNK1D-212ENST00000580061 CPLX1O14810 134 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 IFNAR1P17181 557 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 DSG3P32926 999 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 MAP2K2P36507 400 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 CUL4AQ13619 759 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 CPLX2Q6PUV4 134 aaKnown RBP18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 ADGRF4Q8IZF3 695 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 KIFC2Q96AC6 838 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 PNMA3Q9UL41 463 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 CNTNAP5Q8WYK1 1306 aa18.47■□□□□ 0.55
CSNK1D-212ENST00000580061 IRX3P78415 501 aaPredicted RBP18.46■□□□□ 0.55
CSNK1D-212ENST00000580061 P2RX7Q99572 595 aaKnown RBP18.46■□□□□ 0.55
CSNK1D-212ENST00000580061 JMJD4Q9H9V9 463 aa18.46■□□□□ 0.55
CSNK1D-212ENST00000580061 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
CSNK1D-212ENST00000580061 SPDYE16A6NNV3 312 aaPredicted RBP18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 ANP32AP39687 249 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 HERVK_113P62684 666 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 SAMD1Q6SPF0 538 aaPredicted RBP18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 LBX2Q6XYB7 198 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 PHKBQ93100 1093 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 RANBP17Q9H2T7 1088 aaKnown RBP18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 VAT1LQ9HCJ6 419 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 ADAMTS5Q9UNA0 930 aa18.45■□□□□ 0.54
CSNK1D-212ENST00000580061 CDKL5O76039 1030 aa18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 FDX1P10109 184 aa18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 CYP2C8P10632 490 aa18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 BECN1Q14457 450 aa18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 NSUN7Q8NE18 718 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 RNF26Q9BY78 433 aaPredicted RBP18.44■□□□□ 0.54
CSNK1D-212ENST00000580061 VWA5AO00534 786 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 DTNBO60941 627 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 CDC37Q16543 378 aaPredicted RBP18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 POTEEQ6S8J3 1075 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 SMARCC2Q8TAQ2 1214 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 PIGSQ96S52 555 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 PARK7Q99497 189 aaKnown RBP18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 SMCHD1A6NHR9 2005 aa18.43■□□□□ 0.54
CSNK1D-212ENST00000580061 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 ZBTB5O15062 677 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 PRPF3O43395 683 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 JAK2O60674 1132 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 ZBED4O75132 1171 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 PPFIA3O75145 1194 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 SNAP25P60880 206 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 HOMER1Q86YM7 354 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 REPS2Q8NFH8 660 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
CSNK1D-212ENST00000580061 PNMA6FA0A0J9YX94 578 aa18.41■□□□□ 0.54
CSNK1D-212ENST00000580061 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms