RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
CDK5RAP3-212ENST00000579175 KCNA10Q16322 511 aa15.11■□□□□ 0.01
CDK5RAP3-212ENST00000579175 SYMPKQ92797 1274 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-212ENST00000579175 HAUS7Q99871 368 aa15.11■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ZNF214Q9UL59 606 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-212ENST00000579175 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 MINDY4BA8MYZ0 360 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ZBED4O75132 1171 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 FAAP100Q0VG06 881 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 CCDC129Q6ZRS4 1044 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 GLT1D1Q96MS3 346 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 TEX13BQ9BXU2 312 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 SPC25Q9HBM1 224 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ARPP21Q9UBL0 812 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 COG6Q9Y2V7 657 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 SYNRGQ9UMZ2 1314 aa15.1■□□□□ 0.01
CDK5RAP3-212ENST00000579175 TMEM265A0A087WTH1 108 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 MOXD2PA6NHM9 499 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 F5H6K3 240 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ADAMTS4O75173 837 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 DNAJB2P25686 324 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 KLRC3Q07444 240 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 GRIN2CQ14957 1233 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ANKRD33Q7Z3H0 272 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 ANKRD35Q8N283 1001 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 MSL3Q8N5Y2 521 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 KIFC2Q96AC6 838 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 TOX2Q96NM4 488 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 PUS7LQ9H0K6 701 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 CLIP2Q9UDT6 1046 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 DDX19BQ9UMR2 479 aa15.09■□□□□ 0.01
CDK5RAP3-212ENST00000579175 PARP14Q460N5 1801 aa15.08■□□□□ 0.01
CDK5RAP3-212ENST00000579175 UNC80Q8N2C7 3258 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 SNAI1O95863 264 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 TIMP1P01033 207 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 CCDC174Q6PII3 467 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 PCSK9Q8NBP7 692 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 REPS2Q8NFH8 660 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 CHMP4BQ9H444 224 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 ZNF576Q9H609 170 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 RAVER2Q9HCJ3 691 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 RIPK3Q9Y572 518 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
CDK5RAP3-212ENST00000579175 DUSP11O75319 330 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 APPP05067 770 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 ASGR1P07306 291 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 PPIGQ13427 754 aaKnown RBP eCLIP15.07■□□□□ 03e-9■■■■□ 24
CDK5RAP3-212ENST00000579175 ACVR2BQ13705 512 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 GNASQ5JWF2 1037 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 NOL8Q76FK4 1167 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 ZNF444Q8N0Y2 327 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 TIFAQ96CG3 184 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 GAS2L1Q99501 681 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.07■□□□□ 06e-16■□□□□ 11
CDK5RAP3-212ENST00000579175 NYAP2Q9P242 653 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
CDK5RAP3-212ENST00000579175 MYADML2A6NDP7 307 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 TLR3O15455 904 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 NDUFB10O96000 172 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 RASA1P20936 1047 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 IRX5P78411 483 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 MFSD5Q6N075 450 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 MAMDC4Q6UXC1 1216 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 TMEM199Q8N511 208 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 KLHDC9Q8NEP7 349 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 PPP1R12CQ9BZL4 782 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 ABHD16BQ9H3Z7 469 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 ZNF287Q9HBT7 754 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 PRDM6Q9NQX0 595 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 ZBTB40Q9NUA8 1239 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 FBXO40Q9UH90 709 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 ELP1O95163 1332 aa15.06■□□□□ 0
CDK5RAP3-212ENST00000579175 LAMA2P24043 3122 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 ACRP10323 421 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 CSF2RAP15509 400 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 TDO2P48775 406 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 IKQ13123 557 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 CCDC144BQ3MJ40 725 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 SBK1Q52WX2 424 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 STRBPQ96SI9 672 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 HOMER2Q9NSB8 354 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 ROBO3Q96MS0 1386 aa15.05■□□□□ -0
CDK5RAP3-212ENST00000579175 DNAJC25-GNG10A0A024R161 153 aa15.04■□□□□ -0
CDK5RAP3-212ENST00000579175 GSG1L2A8MUP6 293 aa15.04■□□□□ -0
CDK5RAP3-212ENST00000579175 GRXCR1A8MXD5 290 aa15.04■□□□□ -0
CDK5RAP3-212ENST00000579175 ARVCFO00192 962 aa15.04■□□□□ -0
CDK5RAP3-212ENST00000579175 PRDM1O75626 825 aa15.04■□□□□ -0
CDK5RAP3-212ENST00000579175 TJAP1Q5JTD0 557 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms