RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 CCDC170Q8IYT3 715 aa18.81■□□□□ 0.6
LITAF-209ENST00000571688 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
LITAF-209ENST00000571688 PIH1D3Q9NQM4 214 aaKnown RBP18.81■□□□□ 0.6
LITAF-209ENST00000571688 DUSP10Q9Y6W6 482 aa18.81■□□□□ 0.6
LITAF-209ENST00000571688 RIC1Q4ADV7 1423 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 WNT7AO00755 349 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 NAP1L1P55209 391 aaKnown RBP18.8■□□□□ 0.6
LITAF-209ENST00000571688 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 BANK1Q8NDB2 785 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 TTYH3Q9C0H2 523 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 TCRBV5S4A2TA0A5A2 114 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 CHUKO15111 745 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 A1BGP04217 495 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 RCAN1P53805 252 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 KDM7AQ6ZMT4 941 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 MICALCLQ6ZW33 695 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 SPATA4Q8NEY3 305 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 ZKSCAN4Q969J2 545 aaPredicted RBP18.8■□□□□ 0.6
LITAF-209ENST00000571688 KRT23Q9C075 422 aa18.8■□□□□ 0.6
LITAF-209ENST00000571688 NHEJ1Q9H9Q4 299 aaPredicted RBP18.8■□□□□ 0.6
LITAF-209ENST00000571688 PDE6AP16499 860 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 PRCPP42785 496 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 PPARAQ07869 468 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 WTAPQ15007 396 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 AKNAD1Q5T1N1 836 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 ZNF512BQ96KM6 892 aaPredicted RBP18.79■□□□□ 0.6
LITAF-209ENST00000571688 ZIM3Q96PE6 472 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 EPN3Q9H201 632 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
LITAF-209ENST00000571688 PRLRP16471 622 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 NNTQ13423 1086 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 STIM2Q9P246 746 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 MEGF6O75095 1541 aa18.79■□□□□ 0.6
LITAF-209ENST00000571688 MACROD2A1Z1Q3 448 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
LITAF-209ENST00000571688 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
LITAF-209ENST00000571688 EEF1GP26641 437 aaKnown RBP18.78■□□□□ 0.6
LITAF-209ENST00000571688 LSP1P33241 339 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 KRT2P35908 639 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
LITAF-209ENST00000571688 VAV2P52735 878 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 HAUS3Q68CZ6 603 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 ANKLE2Q86XL3 938 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 IFNL3Q8IZI9 196 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 SH2D3CQ8N5H7 860 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 PHF20Q9BVI0 1012 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 RNF26Q9BY78 433 aaPredicted RBP18.78■□□□□ 0.6
LITAF-209ENST00000571688 VCPKMTQ9H867 229 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 CD248Q9HCU0 757 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.6
LITAF-209ENST00000571688 MCM8Q9UJA3 840 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 GDAQ9Y2T3 454 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 FANCBQ8NB91 859 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 TRIM58Q8NG06 486 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 TSGA10Q9BZW7 698 aa18.78■□□□□ 0.6
LITAF-209ENST00000571688 PATL2C9JE40 543 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 RPN1P04843 607 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 ATP1A2P50993 1020 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 ATP2C1P98194 919 aaPredicted RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 SLC7A5Q01650 507 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 KIF5AQ12840 1032 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 NEDD9Q14511 834 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 PREPLQ4J6C6 727 aaPredicted RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 ZKSCAN3Q9BRR0 538 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 NAPBQ9H115 298 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 AGPAT5Q9NUQ2 364 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 TRIM49BA6NDI0 452 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 SRGNP10124 158 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 SMTNP53814 917 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 ZNF473Q8WTR7 871 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 RNPC3Q96LT9 517 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 PYM1Q9BRP8 204 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 ZNHIT6Q9NWK9 470 aaKnown RBP18.77■□□□□ 0.6
LITAF-209ENST00000571688 GGA2Q9UJY4 613 aa18.77■□□□□ 0.6
LITAF-209ENST00000571688 DNM2P50570 870 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 ACTN3Q08043 901 aaPredicted RBP18.76■□□□□ 0.59
LITAF-209ENST00000571688 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 ZNF174Q15697 407 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 MFSD6Q6ZSS7 791 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 ZNF654Q8IZM8 581 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 GIMAP7Q8NHV1 300 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 MTA3Q9BTC8 594 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 MAPK8IP1Q9UQF2 711 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
LITAF-209ENST00000571688 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 RASSF9O75901 435 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 XBP1P17861 261 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 PKN1Q16512 942 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 THAP9Q9H5L6 903 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 KLC4Q9NSK0 619 aa18.76■□□□□ 0.59
LITAF-209ENST00000571688 MYH10P35580 1976 aa18.75■□□□□ 0.59
LITAF-209ENST00000571688 MRPS25P82663 173 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms