RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 FAM227BQ96M60 508 aa24.56■■□□□ 1.52
LITAF-205ENST00000570904 SYNPO2Q9UMS6 1093 aa24.56■■□□□ 1.52
LITAF-205ENST00000570904 RIPK3Q9Y572 518 aa24.56■■□□□ 1.52
LITAF-205ENST00000570904 ZNFX1Q9P2E3 1918 aaKnown RBP24.55■■□□□ 1.52
LITAF-205ENST00000570904 A0A1W2PPC1 479 aa24.55■■□□□ 1.52
LITAF-205ENST00000570904 ZBED4O75132 1171 aa24.55■■□□□ 1.52
LITAF-205ENST00000570904 CHMP4CQ96CF2 233 aa24.55■■□□□ 1.52
LITAF-205ENST00000570904 FEM1BQ9UK73 627 aa24.55■■□□□ 1.52
LITAF-205ENST00000570904 ISY1Q9ULR0 285 aaKnown RBP24.55■■□□□ 1.52
LITAF-205ENST00000570904 CTDP1Q9Y5B0 961 aaPredicted RBP24.55■■□□□ 1.52
LITAF-205ENST00000570904 TACC3Q9Y6A5 838 aa24.55■■□□□ 1.52
LITAF-205ENST00000570904 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
LITAF-205ENST00000570904 MYCNP04198 464 aaPredicted RBP24.54■■□□□ 1.52
LITAF-205ENST00000570904 B4GALNT3Q6L9W6 998 aa24.54■■□□□ 1.52
LITAF-205ENST00000570904 TINF2Q9BSI4 451 aa24.54■■□□□ 1.52
LITAF-205ENST00000570904 RAVER2Q9HCJ3 691 aaKnown RBP24.54■■□□□ 1.52
LITAF-205ENST00000570904 HELLSQ9NRZ9 838 aa24.54■■□□□ 1.52
LITAF-205ENST00000570904 SOX1O00570 391 aaPredicted RBP24.53■■□□□ 1.52
LITAF-205ENST00000570904 BMP3P12645 472 aa24.53■■□□□ 1.52
LITAF-205ENST00000570904 TAL1P17542 331 aaPredicted RBP24.53■■□□□ 1.52
LITAF-205ENST00000570904 BMP8BP34820 402 aa24.53■■□□□ 1.52
LITAF-205ENST00000570904 ARRDC4Q8NCT1 418 aa24.53■■□□□ 1.52
LITAF-205ENST00000570904 SLC38A10Q9HBR0 1119 aa24.53■■□□□ 1.52
LITAF-205ENST00000570904 DIS3Q9Y2L1 958 aaKnown RBP24.53■■□□□ 1.52
LITAF-205ENST00000570904 TSPY2A6NKD2 308 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 KBTBD13C9JR72 458 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 ATP2A1O14983 1001 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 AAMPQ13685 434 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 SMC5Q8IY18 1101 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 EXOC6Q8TAG9 804 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 RWDD1Q9H446 243 aaPredicted RBP24.52■■□□□ 1.52
LITAF-205ENST00000570904 STX8Q9UNK0 236 aa24.52■■□□□ 1.52
LITAF-205ENST00000570904 PLXNA1Q9UIW2 1896 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 TRIM6-TRIM34B2RNG4 842 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 TMEM232C9JQI7 657 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 NMT2O60551 498 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 NMIQ13287 307 aaPredicted RBP24.51■■□□□ 1.51
LITAF-205ENST00000570904 IL17RBQ9NRM6 502 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 NRBP1Q9UHY1 535 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 ANAPC4Q9UJX5 808 aa24.51■■□□□ 1.51
LITAF-205ENST00000570904 RANBP6O60518 1105 aaKnown RBP24.5■■□□□ 1.51
LITAF-205ENST00000570904 IGHDP01880 384 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 RTP1P59025 263 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 LRRC41Q15345 812 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 ALX1Q15699 326 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 MCMDC2Q4G0Z9 681 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 RASGRP2Q7LDG7 609 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 ZNF589Q86UQ0 364 aaPredicted RBP24.5■■□□□ 1.51
LITAF-205ENST00000570904 DDX11Q96FC9 970 aa24.5■■□□□ 1.51
LITAF-205ENST00000570904 MCCP23508 829 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 SLC1A4P43007 532 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 STAT2P52630 851 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 RILPL2Q969X0 211 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 LENG1Q96BZ8 264 aaPredicted RBP24.49■■□□□ 1.51
LITAF-205ENST00000570904 LRCH3Q96II8 777 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 GMCL1Q96IK5 515 aa24.49■■□□□ 1.51
LITAF-205ENST00000570904 DNAJC25-GNG10A0A024R161 153 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 FGAP02671 866 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 ZNF865P0CJ78 1059 aaPredicted RBP24.48■■□□□ 1.51
LITAF-205ENST00000570904 RARBP10826 455 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 MDM2Q00987 491 aaPredicted RBP24.48■■□□□ 1.51
LITAF-205ENST00000570904 IKQ13123 557 aaPredicted RBP24.48■■□□□ 1.51
LITAF-205ENST00000570904 PPP4R3BQ5MIZ7 849 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 CHD1LQ86WJ1 897 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 UBE2OQ9C0C9 1292 aaKnown RBP24.48■■□□□ 1.51
LITAF-205ENST00000570904 XPNPEP3Q9NQH7 507 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 TOMM22Q9NS69 142 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 HOMER2Q9NSB8 354 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 MTMR7Q9Y216 660 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 CNPY2Q9Y2B0 182 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 ATP11BQ9Y2G3 1177 aa24.48■■□□□ 1.51
LITAF-205ENST00000570904 ORC4O43929 436 aa24.47■■□□□ 1.51
LITAF-205ENST00000570904 HSPD1P10809 573 aaKnown RBP24.47■■□□□ 1.51
LITAF-205ENST00000570904 ADCYAP1R1P41586 468 aa24.47■■□□□ 1.51
LITAF-205ENST00000570904 OAZ1P54368 228 aa24.47■■□□□ 1.51
LITAF-205ENST00000570904 KCTD1Q719H9 257 aa24.47■■□□□ 1.51
LITAF-205ENST00000570904 FERMT2Q96AC1 680 aa24.47■■□□□ 1.51
LITAF-205ENST00000570904 SMCHD1A6NHR9 2005 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 CCDC171Q6TFL3 1326 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 PGK1P00558 417 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 AKR1A1P14550 325 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 NUCB1Q02818 461 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 RRP12Q5JTH9 1297 aaKnown RBP24.46■■□□□ 1.51
LITAF-205ENST00000570904 SLC39A5Q6ZMH5 540 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.46■■□□□ 1.51
LITAF-205ENST00000570904 FAM160B2Q86V87 743 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 PLEKHM2Q8IWE5 1019 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 ANKRD35Q8N283 1001 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 CHST13Q8NET6 341 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 CHURC1Q8WUH1 139 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 STAG1Q8WVM7 1258 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 FBXO40Q9UH90 709 aa24.46■■□□□ 1.51
LITAF-205ENST00000570904 SYNGAP1Q96PV0 1343 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 SNAI1O95863 264 aaPredicted RBP24.45■■□□□ 1.5
LITAF-205ENST00000570904 FGRP09769 529 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 HAND2P61296 217 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 TICAM2Q86XR7 235 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 TDHQ8IZJ6 230 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 MSL3Q8N5Y2 521 aaKnown RBP24.45■■□□□ 1.5
LITAF-205ENST00000570904 FGD4Q96M96 766 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms