RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 K7ELQ4 463 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 CCDC83Q8IWF9 413 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 PTPN18Q99952 460 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 SLF1Q9BQI6 1058 aa16.59■□□□□ 0.25
KLHDC4-222ENST00000568444 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 ASCC2Q9H1I8 757 aaPredicted RBP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 CTDP1Q9Y5B0 961 aaPredicted RBP16.58■□□□□ 0.24
KLHDC4-222ENST00000568444 THSD7BQ9C0I4 1608 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 COG2Q14746 738 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 BTNL9Q6UXG8 535 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 SRBD1Q8N5C6 995 aaKnown RBP16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PPP1R9AQ9ULJ8 1098 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PRR12Q9ULL5 1215 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
KLHDC4-222ENST00000568444 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 CNTNAP5Q8WYK1 1306 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 PLA2G6O60733 806 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 CDKL5O76039 1030 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 CYP2C8P10632 490 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 DSG3P32926 999 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 MAP2K2P36507 400 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 TM4SF4P48230 202 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 SNAP25P60880 206 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 BECN1Q14457 450 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 ADGRF4Q8IZF3 695 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 SMCR8Q8TEV9 937 aaPredicted RBP16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 PHKBQ93100 1093 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 ATG4CQ96DT6 458 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
KLHDC4-222ENST00000568444 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 SPDYE16A6NNV3 312 aaPredicted RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 HERVK_113P62684 666 aa16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 TAF1CQ15572 869 aaPredicted RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 P2RX7Q99572 595 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 SLC26A6Q9BXS9 759 aa16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 HOXC10Q9NYD6 342 aa16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 SEC63Q9UGP8 760 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-222ENST00000568444 CYTH3O43739 400 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 DTNBO60941 627 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 ZBED4O75132 1171 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 IFNAR1P17181 557 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 CCDC174Q6PII3 467 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 TRIM22Q8IYM9 498 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 RRP36Q96EU6 259 aaKnown RBP16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 PIGSQ96S52 555 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 PAGR1Q9BTK6 254 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 JMJD4Q9H9V9 463 aa16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
KLHDC4-222ENST00000568444 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 RLFQ13129 1914 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 hCG_1642624A0A1W2PR95 340 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 VWA5AO00534 786 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 ALDH1A1P00352 501 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 SMARCA1P28370 1054 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 NTRK3Q16288 839 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 GTF3C2Q8WUA4 911 aaPredicted RBP16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 RANBP17Q9H2T7 1088 aaKnown RBP16.53■□□□□ 0.24
KLHDC4-222ENST00000568444 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 JAK2O60674 1132 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 FDX1P10109 184 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 FUT2Q10981 343 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 PLS1Q14651 629 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 LLPHQ9BRT6 129 aaKnown RBP16.52■□□□□ 0.24
KLHDC4-222ENST00000568444 RNF26Q9BY78 433 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms