RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
SF3B3-210ENST00000567654 POLIQ9UNA4 740 aa6.89□□□□□ -1.31
SF3B3-210ENST00000567654 SLX4Q8IY92 1834 aa6.89□□□□□ -1.31
SF3B3-210ENST00000567654 NAV1Q8NEY1 1877 aa6.89□□□□□ -1.31
SF3B3-210ENST00000567654 MYH6P13533 1939 aa6.89□□□□□ -1.31
SF3B3-210ENST00000567654 TIAM2Q8IVF5 1701 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 DUOX1Q9NRD9 1551 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 MAST3O60307 1309 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 MROH5Q6ZUA9 1318 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 A0A0G2JLW4 131 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 M0R2C6 588 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 XYLBO75191 536 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 APBA3O96018 575 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 EPB42P16452 691 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 NPR3P17342 541 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 NFKB1P19838 968 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 RXRBP28702 533 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 TBC1D8BQ0IIM8 1120 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 ADCK5Q3MIX3 580 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 VPS53Q5VIR6 699 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 PRR5LQ6MZQ0 368 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 NBPF5PQ86XG9 351 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 KCNB2Q92953 911 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 UPF3BQ9BZI7 483 aaKnown RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 IGFLR1Q9H665 355 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 PIH1D3Q9NQM4 214 aaKnown RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 ZFATQ9P243 1243 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 AKAP2Q9Y2D5 859 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 RBM8AQ9Y5S9 174 aaKnown RBP6.88□□□□□ -1.31
SF3B3-210ENST00000567654 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 MYH1P12882 1939 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 MYH8P13535 1937 aa6.88□□□□□ -1.31
SF3B3-210ENST00000567654 PSME4Q14997 1843 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 KIF13BQ9NQT8 1826 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 IRS2Q9Y4H2 1338 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 HIP1O00291 1037 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 FOXP2O15409 715 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 EPB41L2O43491 1005 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 WIPF1O43516 503 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 PDGFAP04085 211 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 KLRK1P26718 216 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 IGHMBP2P38935 993 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 ANAPC15P60006 121 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 CCINQ13939 588 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 NECTIN1Q15223 517 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 PUM3Q15397 648 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 CCDC158Q5M9N0 1113 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 ZMYM1Q5SVZ6 1142 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 CREB3L3Q68CJ9 461 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 RUFY2Q8WXA3 655 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 PIK3R5Q8WYR1 880 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 MAP4K1Q92918 833 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 MPHOSPH8Q99549 860 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 NYXQ9GZU5 481 aa6.87□□□□□ -1.31
SF3B3-210ENST00000567654 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 BRCA1P38398 1863 aaKnown RBP6.87□□□□□ -1.31
SF3B3-210ENST00000567654 PNPLA7Q6ZV29 1317 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 SLC27A2O14975 620 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 PLSCR1O15162 318 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 RNF113AO15541 343 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 SLURP2P0DP57 97 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 MCCP23508 829 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 NEK4P51957 841 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 RASGRF1Q13972 1273 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 ZNF468Q5VIY5 522 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 NOL8Q76FK4 1167 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 FCHSD1Q86WN1 690 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 COL23A1Q86Y22 540 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 ANKRD18AQ8IVF6 992 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 LPIN2Q92539 896 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 OSBP2Q969R2 916 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 ZNF512BQ96KM6 892 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 TTC14Q96N46 770 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 PNMA5Q96PV4 448 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 CDC5LQ99459 802 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 HMG20BQ9P0W2 317 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 MINPP1Q9UNW1 487 aa6.86□□□□□ -1.31
SF3B3-210ENST00000567654 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 DDX60LQ5H9U9 1706 aaKnown RBP6.86□□□□□ -1.31
SF3B3-210ENST00000567654 ZNF804BA4D1E1 1349 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 DTNBO60941 627 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 LARGE1O95461 756 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 SERPINB2P05120 415 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 CELA2BP08218 269 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-210ENST00000567654 SLC5A1P13866 664 aa6.85□□□□□ -1.31
SF3B3-210ENST00000567654 ADD2P35612 726 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms