RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZMYM1Q5SVZ6 1142 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 C1orf53Q5VUE5 145 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 SLC39A5Q6ZMH5 540 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 ZNF467Q7Z7K2 595 aaPredicted RBP22.1■■□□□ 1.13
LINC01238-205ENST00000567549 CHST13Q8NET6 341 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 NEDD1Q8NHV4 660 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 PI4K2BQ8TCG2 481 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 CHURC1Q8WUH1 139 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 CEP95Q96GE4 821 aa22.1■■□□□ 1.13
LINC01238-205ENST00000567549 ISY1Q9ULR0 285 aaKnown RBP22.1■■□□□ 1.13
LINC01238-205ENST00000567549 IGKV6D-41A0A0C4DH26 115 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 PGK2P07205 417 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 MDM2Q00987 491 aaPredicted RBP22.09■■□□□ 1.13
LINC01238-205ENST00000567549 PPARAQ07869 468 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 LRRC41Q15345 812 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 FAM160B2Q86V87 743 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 REPS2Q8NFH8 660 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 KIFC2Q96AC6 838 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 EVI5LQ96CN4 794 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 PCDHB15Q9Y5E8 787 aa22.09■■□□□ 1.13
LINC01238-205ENST00000567549 SOX1O00570 391 aaPredicted RBP22.08■■□□□ 1.13
LINC01238-205ENST00000567549 PRDM1O75626 825 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 BMP3P12645 472 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 STAT2P52630 851 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 IKQ13123 557 aaPredicted RBP22.08■■□□□ 1.13
LINC01238-205ENST00000567549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.08■■□□□ 1.13
LINC01238-205ENST00000567549 CPXCR1Q8N123 301 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 ANKRD35Q8N283 1001 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 LRCH3Q96II8 777 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 NUP88Q99567 741 aaPredicted RBP22.08■■□□□ 1.13
LINC01238-205ENST00000567549 SPC25Q9HBM1 224 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 FAM184BQ9ULE4 1060 aa22.08■■□□□ 1.13
LINC01238-205ENST00000567549 TSPY2A6NKD2 308 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 TFAP4Q01664 338 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 FAM47AQ5JRC9 791 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 PRAMEF19Q5SWL8 479 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 ANKRD45Q5TZF3 282 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 ANO1Q5XXA6 986 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 SLFN13Q68D06 897 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 NUP133Q8WUM0 1156 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 TSEN34Q9BSV6 310 aaKnown RBP22.07■■□□□ 1.12
LINC01238-205ENST00000567549 SLC38A10Q9HBR0 1119 aa22.07■■□□□ 1.12
LINC01238-205ENST00000567549 ADCYAP1R1P41586 468 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 SLC1A4P43007 532 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 SNX17Q15036 470 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 MAMDC4Q6UXC1 1216 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 DEFB123Q8N688 67 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 GMCL1Q96IK5 515 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 PHF24Q9UPV7 400 aa22.06■■□□□ 1.12
LINC01238-205ENST00000567549 SLC4A3P48751 1232 aa22.05■■□□□ 1.12
LINC01238-205ENST00000567549 TKFCQ3LXA3 575 aa22.05■■□□□ 1.12
LINC01238-205ENST00000567549 PRDM5Q9NQX1 630 aaPredicted RBP22.05■■□□□ 1.12
LINC01238-205ENST00000567549 HELLSQ9NRZ9 838 aa22.05■■□□□ 1.12
LINC01238-205ENST00000567549 TACC3Q9Y6A5 838 aa22.05■■□□□ 1.12
LINC01238-205ENST00000567549 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
LINC01238-205ENST00000567549 MOXD2PA6NHM9 499 aa22.04■■□□□ 1.12
LINC01238-205ENST00000567549 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
LINC01238-205ENST00000567549 LRRC47Q8N1G4 583 aaKnown RBP22.04■■□□□ 1.12
LINC01238-205ENST00000567549 ABHD16BQ9H3Z7 469 aa22.04■■□□□ 1.12
LINC01238-205ENST00000567549 STX8Q9UNK0 236 aa22.04■■□□□ 1.12
LINC01238-205ENST00000567549 DNAJC25-GNG10A0A024R161 153 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 TMEM232C9JQI7 657 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 PLA2G6O60733 806 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 MFAP1P55081 439 aaKnown RBP22.03■■□□□ 1.12
LINC01238-205ENST00000567549 TRIM60Q495X7 471 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 PCSK9Q8NBP7 692 aaKnown RBP22.03■■□□□ 1.12
LINC01238-205ENST00000567549 FERMT2Q96AC1 680 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 SEC62Q99442 399 aaKnown RBP22.03■■□□□ 1.12
LINC01238-205ENST00000567549 ACAD9Q9H845 621 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 RAVER2Q9HCJ3 691 aaKnown RBP22.03■■□□□ 1.12
LINC01238-205ENST00000567549 ZHX1Q9UKY1 873 aaPredicted RBP22.03■■□□□ 1.12
LINC01238-205ENST00000567549 MROH7Q68CQ1 1323 aa22.03■■□□□ 1.12
LINC01238-205ENST00000567549 DUSP11O75319 330 aaKnown RBP22.02■■□□□ 1.12
LINC01238-205ENST00000567549 ZNF865P0CJ78 1059 aaPredicted RBP22.02■■□□□ 1.12
LINC01238-205ENST00000567549 FAM109BQ6ICB4 259 aaPredicted RBP22.02■■□□□ 1.12
LINC01238-205ENST00000567549 STAG1Q8WVM7 1258 aa22.02■■□□□ 1.12
LINC01238-205ENST00000567549 ANAPC4Q9UJX5 808 aa22.02■■□□□ 1.12
LINC01238-205ENST00000567549 PNMA2Q9UL42 364 aa22.02■■□□□ 1.12
LINC01238-205ENST00000567549 DCDC2CA8MYV0 355 aa22.01■■□□□ 1.11
LINC01238-205ENST00000567549 PGK1P00558 417 aa22.01■■□□□ 1.11
LINC01238-205ENST00000567549 PCP11498 1178 aaKnown RBP22.01■■□□□ 1.11
LINC01238-205ENST00000567549 SLC17A8Q8NDX2 589 aa22.01■■□□□ 1.11
LINC01238-205ENST00000567549 RIPK3Q9Y572 518 aa22.01■■□□□ 1.11
LINC01238-205ENST00000567549 A0A1W2PQ45 241 aaPredicted RBP22■■□□□ 1.11
LINC01238-205ENST00000567549 A0A1W2PQY0 241 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 ASB14A6NK59 587 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 RANBP6O60518 1105 aaKnown RBP22■■□□□ 1.11
LINC01238-205ENST00000567549 CLTBP09497 229 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 NT5C2P49902 561 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 ACVR2BQ13705 512 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 ALX1Q15699 326 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 RCSD1Q6JBY9 416 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 OTUD7AQ8TE49 926 aaPredicted RBP22■■□□□ 1.11
LINC01238-205ENST00000567549 STARD7Q9NQZ5 370 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 PDLIM7Q9NR12 457 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 TOMM22Q9NS69 142 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 CDKN2AIPQ9NXV6 580 aaPredicted RBP22■■□□□ 1.11
LINC01238-205ENST00000567549 STXBP5LQ9Y2K9 1186 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 SALL3Q9BXA9 1300 aa22■■□□□ 1.11
LINC01238-205ENST00000567549 LTBP2Q14767 1821 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms