RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 EGFRP00533 1210 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 CFHP08603 1231 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 VIL1P09327 827 aaKnown RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 XRCC6P12956 609 aaKnown RBP eCLIP7.2□□□□□ -1.263e-6■■■□□ 16.1
CHD9-217ENST00000565832 PTMSP20962 102 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 SHMT1P34896 483 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 RASSF7Q02833 373 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 USP17L2Q6R6M4 530 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 SUPT20HQ8NEM7 779 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 GMLQ99445 158 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 MAD2L2Q9UI95 211 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 SERPINB13Q9UIV8 391 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 SERPINA10Q9UK55 444 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 MYH6P13533 1939 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
CHD9-217ENST00000565832 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
CHD9-217ENST00000565832 CCDC196A0A1B0GTZ2 297 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 USP17L5A8MUK1 530 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 BHMG1C9JSJ3 638 aaPredicted RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 MPHOSPH10O00566 681 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 CYTH3O43739 400 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 IGSF3O75054 1194 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 JAG1P78504 1218 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 EARS2Q5JPH6 523 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 TMTC3Q6ZXV5 915 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 TRIM22Q8IYM9 498 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 LRRC47Q8N1G4 583 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 MRIQ9BWK5 157 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 SCAND2PQ9GZW5 306 aaPredicted RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 VAT1LQ9HCJ6 419 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 CLIP2Q9UDT6 1046 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 RCOR1Q9UKL0 485 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 ZNRF3Q9ULT6 936 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 FOCADQ5VW36 1801 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 DLEC1Q9Y238 1755 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 ECM29Q5VYK3 1845 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 POTEB3A0JP26 581 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 NR1I2O75469 434 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 MBD3O95983 291 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 MARCKSP29966 332 aaPredicted RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 GNL2Q13823 731 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 RRP1BQ14684 758 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 POTEBQ6S5H4 581 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 LAPTM4BQ86VI4 370 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 CERS3Q8IU89 383 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 CTCFLQ8NI51 663 aaPredicted RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 ZFRQ96KR1 1074 aaKnown RBP7.19□□□□□ -1.26
CHD9-217ENST00000565832 UBA5Q9GZZ9 404 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 TAOK3Q9H2K8 898 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 CFAP45Q9UL16 551 aa7.19□□□□□ -1.26
CHD9-217ENST00000565832 KIF13BQ9NQT8 1826 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 GOLGA6L4A6NEF3 574 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 PRPF3O43395 683 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 DDAH1O94760 285 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 DEXIO95424 95 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 MMP1P03956 469 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 U2AF2P26368 475 aaKnown RBP eCLIP7.18□□□□□ -1.263e-6■■■□□ 15.3
CHD9-217ENST00000565832 ME1P48163 572 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 FKBP1AP62942 108 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 TRIM29Q14134 588 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 NIM1KQ8IY84 436 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 DIS3L2Q8IYB7 885 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 ANKS1AQ92625 1134 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 ERCC4Q92889 916 aaPredicted RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 GPKOWQ92917 476 aaPredicted RBP eCLIP7.18□□□□□ -1.26
CHD9-217ENST00000565832 RBSNQ9H1K0 784 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 GOLPH3LQ9H4A5 285 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 CABP5Q9NP86 173 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 TCP11L1Q9NUJ3 509 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 MTMR4Q9NYA4 1195 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 DACT1Q9NYF0 836 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 PCDHA7Q9UN72 937 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 MRVI1Q9Y6F6 885 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 FRMPD2Q68DX3 1309 aaPredicted RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 NID2Q14112 1375 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 WNT7AO00755 349 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 ELP1O95163 1332 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 GDF11O95390 407 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 CALM1P0DP23 149 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 CALM2P0DP24 149 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 CALM3P0DP25 149 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 ABL2P42684 1182 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 HDLBPQ00341 1268 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 AKAP17AQ02040 695 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 MTMR2Q13614 643 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 SF3A1Q15459 793 aaKnown RBP7.18□□□□□ -1.26
CHD9-217ENST00000565832 NPY5RQ15761 445 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 MIGA2Q7L4E1 593 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 OGFOD1Q8N543 542 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 LINC00301Q8NCQ3 95 aa7.18□□□□□ -1.26
CHD9-217ENST00000565832 RNF214Q8ND24 703 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms