RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CDH23Q9H251 3354 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PFASO15067 1338 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 ADGRA2Q96PE1 1338 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PNMA6EA0A0J9YXQ4 647 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PDE8AO60658 829 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 IGHDP01880 384 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 CENPBP07199 599 aaPredicted RBP7.63□□□□□ -1.19
UBFD1-204ENST00000565634 CSF1RP07333 972 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 NEXNQ0ZGT2 675 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
UBFD1-204ENST00000565634 GRIK5Q16478 980 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 LMBR1LQ6UX01 489 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 ERO1BQ86YB8 467 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 FTSJ3Q8IY81 847 aaKnown RBP7.63□□□□□ -1.19
UBFD1-204ENST00000565634 SVOPQ8N4V2 548 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 TTLL11Q8NHH1 800 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 SNX27Q96L92 541 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PUS3Q9BZE2 481 aaKnown RBP7.63□□□□□ -1.19
UBFD1-204ENST00000565634 EPHX3Q9H6B9 360 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PPP2R3BQ9Y5P8 575 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 PLXNA1Q9UIW2 1896 aa7.63□□□□□ -1.19
UBFD1-204ENST00000565634 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-204ENST00000565634 UNCXA6NJT0 531 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 BCRP11274 1271 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 RFX5P48382 616 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-204ENST00000565634 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-204ENST00000565634 MOGSQ13724 837 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 GAS6Q14393 721 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 GRIN2CQ14957 1233 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 GPAT2Q6NUI2 795 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 LYSMD3Q7Z3D4 306 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 PRICKLE2Q7Z3G6 844 aa7.62□□□□□ -1.19
UBFD1-204ENST00000565634 PA2G4Q9UQ80 394 aaKnown RBP7.62□□□□□ -1.19
UBFD1-204ENST00000565634 ARAP2Q8WZ64 1704 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 TNPO2O14787 897 aaKnown RBP7.61□□□□□ -1.19
UBFD1-204ENST00000565634 PEX10O60683 326 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 GPR37L1O60883 481 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 RHOQP17081 205 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 RFX1P22670 979 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 KCNJ4P48050 445 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 ATP8B2P98198 1209 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 LYPD4Q6UWN0 246 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 ANKRD23Q86SG2 305 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 SKAP1Q86WV1 359 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 LRFN3Q9BTN0 628 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
UBFD1-204ENST00000565634 PLXNB2O15031 1838 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 COL1A1P02452 1464 aaPredicted RBP7.61□□□□□ -1.19
UBFD1-204ENST00000565634 SMCHD1A6NHR9 2005 aa7.61□□□□□ -1.19
UBFD1-204ENST00000565634 UBTFL1P0CB47 393 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-204ENST00000565634 PPIL2Q13356 520 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 LRRC24Q50LG9 513 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 CEP85Q6P2H3 762 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 ANKRD13CQ8N6S4 541 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 UHRF1Q96T88 793 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-204ENST00000565634 LBHD1Q9BQE6 289 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-204ENST00000565634 PLA2G12BQ9BX93 195 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
UBFD1-204ENST00000565634 PTPRFP10586 1907 aa7.6□□□□□ -1.19
UBFD1-204ENST00000565634 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 ZBBXA8MT70 800 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 GNAI2P04899 355 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 FBXO45P0C2W1 286 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CYP2B6P20813 491 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CTSWP56202 376 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CHRNDQ07001 517 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 RABL6Q3YEC7 729 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CCDC84Q86UT8 332 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CDC5LQ99459 802 aaKnown RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 SENP6Q9GZR1 1112 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 DDX19BQ9UMR2 479 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 IQSEC3Q9UPP2 1182 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-204ENST00000565634 LEMD3Q9Y2U8 911 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
UBFD1-204ENST00000565634 LTBP2Q14767 1821 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 A0A1W2PRU2 124 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 GNAI3P08754 354 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 IRS1P35568 1242 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 CRKP46108 304 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
UBFD1-204ENST00000565634 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
UBFD1-204ENST00000565634 PPATQ06203 517 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 ATG9AQ7Z3C6 839 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 ASB2Q96Q27 587 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 SIL1Q9H173 461 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 ZCCHC17Q9NP64 241 aaKnown RBP7.58□□□□□ -1.2
UBFD1-204ENST00000565634 OGDHLQ9ULD0 1010 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 GBF1Q92538 1859 aa7.58□□□□□ -1.2
UBFD1-204ENST00000565634 FRMPD3Q5JV73 1810 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 BDP1A6H8Y1 2624 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 COL2A1P02458 1487 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 RNF225M0QZC1 329 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 SRGAP3O43295 1099 aa7.57□□□□□ -1.2
UBFD1-204ENST00000565634 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-204ENST00000565634 CELA2BP08218 269 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms