RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 MYO3BQ8WXR4 1341 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 C10orf71Q711Q0 1435 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 USP17L5A8MUK1 530 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 G3V3G9 751 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 SCNN1DP51172 638 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 DCAF8Q5TAQ9 597 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 VSTM4Q8IW00 320 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 TEKT1Q969V4 418 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 C16orf45Q96MC5 204 aaPredicted RBP22.15■■□□□ 1.14
CDH5-204ENST00000563425 SERPINB13Q9UIV8 391 aa22.15■■□□□ 1.14
CDH5-204ENST00000563425 AKR1B1P15121 316 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 SFPQP23246 707 aaKnown RBP eCLIP22.14■■□□□ 1.14
CDH5-204ENST00000563425 CASP1P29466 404 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 GTF2F1P35269 517 aaKnown RBP eCLIP22.14■■□□□ 1.14
CDH5-204ENST00000563425 NAPAP54920 295 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 TPD52L1Q16890 204 aaPredicted RBP22.14■■□□□ 1.14
CDH5-204ENST00000563425 INF2Q27J81 1249 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 CDC42EP5Q6NZY7 148 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 RIOX1Q9H6W3 641 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 SWAP70Q9UH65 585 aa22.14■■□□□ 1.14
CDH5-204ENST00000563425 SIPA1L1O43166 1804 aa22.14■■□□□ 1.13
CDH5-204ENST00000563425 PDHBP11177 359 aa22.14■■□□□ 1.13
CDH5-204ENST00000563425 MSL1Q68DK7 614 aa22.14■■□□□ 1.13
CDH5-204ENST00000563425 PODNQ7Z5L7 613 aa22.14■■□□□ 1.13
CDH5-204ENST00000563425 TRMT44Q8IYL2 757 aaKnown RBP22.14■■□□□ 1.13
CDH5-204ENST00000563425 ZNF622Q969S3 477 aaKnown RBP eCLIP22.14■■□□□ 1.13
CDH5-204ENST00000563425 SEC63Q9UGP8 760 aaKnown RBP22.14■■□□□ 1.13
CDH5-204ENST00000563425 APOBEC3HQ6NTF7 200 aaKnown RBP22.13■■□□□ 1.13
CDH5-204ENST00000563425 KRT25Q7Z3Z0 450 aa22.13■■□□□ 1.13
CDH5-204ENST00000563425 C6orf50Q9HD87 102 aa22.13■■□□□ 1.13
CDH5-204ENST00000563425 INTS13Q9NVM9 706 aa22.13■■□□□ 1.13
CDH5-204ENST00000563425 LAD1O00515 517 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 GNA11P29992 359 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 TXLNAP40222 546 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 CUL4BQ13620 913 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 ASPRV1Q53RT3 343 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 DTHD1Q6ZMT9 781 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 HOMER1Q86YM7 354 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 C2CD5Q86YS7 1000 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 PIGSQ96S52 555 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 SMCO2A6NFE2 343 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 USP27XA6NNY8 438 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 GTPBP6O43824 516 aaPredicted RBP22.12■■□□□ 1.13
CDH5-204ENST00000563425 SNHG28P0DPA3 235 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 TNNT1P13805 278 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 CD44P16070 742 aaKnown RBP22.12■■□□□ 1.13
CDH5-204ENST00000563425 PRPHP41219 470 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 KCNJ6P48051 423 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 STYK1Q6J9G0 422 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 CCAR2Q8N163 923 aaKnown RBP22.12■■□□□ 1.13
CDH5-204ENST00000563425 MTRQ99707 1265 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 TMEM60Q9H2L4 133 aa22.12■■□□□ 1.13
CDH5-204ENST00000563425 ESYT2A0FGR8 921 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 TMEM232C9JQI7 657 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 hCG_1984214I3L0E3 225 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 SHMT1P34896 483 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 ZNF713Q8N859 430 aaPredicted RBP22.11■■□□□ 1.13
CDH5-204ENST00000563425 DBNDD1Q9H9R9 158 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 VAT1LQ9HCJ6 419 aa22.11■■□□□ 1.13
CDH5-204ENST00000563425 CDK11BP21127 795 aaKnown RBP22.1■■□□□ 1.13
CDH5-204ENST00000563425 CRKP46108 304 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 FKBP1AP62942 108 aaKnown RBP22.1■■□□□ 1.13
CDH5-204ENST00000563425 SPATA1Q5VX52 437 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 STAMQ92783 540 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 ZDHHC15Q96MV8 337 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 MRIQ9BWK5 157 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 UBA5Q9GZZ9 404 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 SYNRGQ9UMZ2 1314 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 PPP1R3GB7ZBB8 358 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 TTLL1O95922 423 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 NONOQ15233 471 aaKnown RBP eCLIP22.1■■□□□ 1.13
CDH5-204ENST00000563425 HSP90AA4PQ58FG1 418 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 NYAP1Q6ZVC0 841 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 LRRC47Q8N1G4 583 aaKnown RBP22.1■■□□□ 1.13
CDH5-204ENST00000563425 KCNQ5Q9NR82 932 aa22.1■■□□□ 1.13
CDH5-204ENST00000563425 SAMSN1Q9NSI8 373 aaKnown RBP22.1■■□□□ 1.13
CDH5-204ENST00000563425 FRMPD2Q68DX3 1309 aaPredicted RBP22.09■■□□□ 1.13
CDH5-204ENST00000563425 H0YIN7 160 aa22.09■■□□□ 1.13
CDH5-204ENST00000563425 NRDCO43847 1150 aa22.09■■□□□ 1.13
CDH5-204ENST00000563425 HLA-DOAP06340 250 aa22.09■■□□□ 1.13
CDH5-204ENST00000563425 CDC25AP30304 524 aa22.09■■□□□ 1.13
CDH5-204ENST00000563425 DISC1Q9NRI5 854 aa22.09■■□□□ 1.13
CDH5-204ENST00000563425 RIOK3O14730 519 aaKnown RBP22.08■■□□□ 1.13
CDH5-204ENST00000563425 KARSQ15046 597 aaKnown RBP22.08■■□□□ 1.13
CDH5-204ENST00000563425 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
CDH5-204ENST00000563425 CCSER1Q9C0I3 900 aa22.08■■□□□ 1.13
CDH5-204ENST00000563425 EHD4Q9H223 541 aa22.08■■□□□ 1.13
CDH5-204ENST00000563425 BLZF1Q9H2G9 400 aa22.08■■□□□ 1.13
CDH5-204ENST00000563425 STAT6P42226 847 aa22.08■■□□□ 1.12
CDH5-204ENST00000563425 EIF6P56537 245 aaKnown RBP22.08■■□□□ 1.12
CDH5-204ENST00000563425 NFIAQ12857 509 aa22.08■■□□□ 1.12
CDH5-204ENST00000563425 STRIP1Q5VSL9 837 aa22.08■■□□□ 1.12
CDH5-204ENST00000563425 CLEC10AQ8IUN9 316 aa22.08■■□□□ 1.12
CDH5-204ENST00000563425 TBX2Q13207 712 aaPredicted RBP22.07■■□□□ 1.12
CDH5-204ENST00000563425 E4F1Q66K89 784 aaPredicted RBP22.07■■□□□ 1.12
CDH5-204ENST00000563425 KLHL10Q6JEL2 608 aa22.07■■□□□ 1.12
CDH5-204ENST00000563425 SMYD4Q8IYR2 804 aaPredicted RBP22.07■■□□□ 1.12
CDH5-204ENST00000563425 CCDC112Q8NEF3 446 aa22.07■■□□□ 1.12
CDH5-204ENST00000563425 TMX1Q9H3N1 280 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms