RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GJC2Q5T442 439 aaPredicted RBP18.56■□□□□ 0.56
USB1-208ENST00000563207 CEP95Q96GE4 821 aa18.56■□□□□ 0.56
USB1-208ENST00000563207 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
USB1-208ENST00000563207 MAML3Q96JK9 1138 aa18.56■□□□□ 0.56
USB1-208ENST00000563207 SENP6Q9GZR1 1112 aaPredicted RBP18.56■□□□□ 0.56
USB1-208ENST00000563207 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
USB1-208ENST00000563207 ZNF214Q9UL59 606 aaPredicted RBP18.56■□□□□ 0.56
USB1-208ENST00000563207 SMCHD1A6NHR9 2005 aa18.56■□□□□ 0.56
USB1-208ENST00000563207 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
USB1-208ENST00000563207 HSPD1P10809 573 aaKnown RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 TAL1P17542 331 aaPredicted RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 MAGEA10P43363 369 aaPredicted RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
USB1-208ENST00000563207 OLFML2BQ68BL8 750 aa18.55■□□□□ 0.56
USB1-208ENST00000563207 ZNF589Q86UQ0 364 aaPredicted RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 RIOX2Q8IUF8 465 aa18.55■□□□□ 0.56
USB1-208ENST00000563207 LRRC47Q8N1G4 583 aaKnown RBP18.55■□□□□ 0.56
USB1-208ENST00000563207 NAPBQ9H115 298 aa18.55■□□□□ 0.56
USB1-208ENST00000563207 SGSM2O43147 1006 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 CDC45O75419 566 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 FCER1AP12319 257 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 STAT3P40763 770 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 CTDSPL2Q05D32 466 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 ZNF444Q8N0Y2 327 aaPredicted RBP18.54■□□□□ 0.56
USB1-208ENST00000563207 MMP19Q99542 508 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
USB1-208ENST00000563207 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
USB1-208ENST00000563207 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
USB1-208ENST00000563207 ABRAQ8N0Z2 381 aa18.53■□□□□ 0.56
USB1-208ENST00000563207 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
USB1-208ENST00000563207 MTMR4Q9NYA4 1195 aa18.53■□□□□ 0.56
USB1-208ENST00000563207 NMT2O60551 498 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 SLC25A27O95847 323 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 TFAP4Q01664 338 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 PPARAQ07869 468 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 ZNF792Q3KQV3 632 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 MKL1Q969V6 931 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 LENG1Q96BZ8 264 aaPredicted RBP18.52■□□□□ 0.56
USB1-208ENST00000563207 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
USB1-208ENST00000563207 LAMA2P24043 3122 aaKnown RBP18.51■□□□□ 0.55
USB1-208ENST00000563207 FGAP02671 866 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
USB1-208ENST00000563207 MDM2Q00987 491 aaPredicted RBP18.51■□□□□ 0.55
USB1-208ENST00000563207 CPXCR1Q8N123 301 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 NEDD1Q8NHV4 660 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 KIFC2Q96AC6 838 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 ESYT1Q9BSJ8 1104 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 RAVER2Q9HCJ3 691 aaKnown RBP18.51■□□□□ 0.55
USB1-208ENST00000563207 CTNNA3Q9UI47 895 aa18.51■□□□□ 0.55
USB1-208ENST00000563207 DNM1LO00429 736 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 SEPT4O43236 478 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 BMP8BP34820 402 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 SNRNP48Q6IEG0 339 aaKnown RBP18.5■□□□□ 0.55
USB1-208ENST00000563207 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 IL17RBQ9NRM6 502 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
USB1-208ENST00000563207 MSCO60682 206 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 KCTD2Q14681 263 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
USB1-208ENST00000563207 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 TINF2Q9BSI4 451 aa18.49■□□□□ 0.55
USB1-208ENST00000563207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
USB1-208ENST00000563207 PLIN4Q96Q06 1357 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 TTLL1O95922 423 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 ZNF865P0CJ78 1059 aaPredicted RBP18.48■□□□□ 0.55
USB1-208ENST00000563207 ADCYAP1R1P41586 468 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 RTP1P59025 263 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 SNAP25P60880 206 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 IRX5P78411 483 aaPredicted RBP18.48■□□□□ 0.55
USB1-208ENST00000563207 PDE4BQ07343 736 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 LRRC41Q15345 812 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 IL25Q9H293 177 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 SLC5A4Q9NY91 659 aa18.48■□□□□ 0.55
USB1-208ENST00000563207 LAMA4Q16363 1823 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 A0A1W2PPC1 479 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 EIF5BO60841 1220 aaKnown RBP18.47■□□□□ 0.55
USB1-208ENST00000563207 SNAI1O95863 264 aaPredicted RBP18.47■□□□□ 0.55
USB1-208ENST00000563207 PGK1P00558 417 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
USB1-208ENST00000563207 NT5C2P49902 561 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 SLC39A5Q6ZMH5 540 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 FGD4Q96M96 766 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 TEX13BQ9BXU2 312 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 UBE2OQ9C0C9 1292 aaKnown RBP18.47■□□□□ 0.55
USB1-208ENST00000563207 SLC38A10Q9HBR0 1119 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 ATP11BQ9Y2G3 1177 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 MCM3APO60318 1980 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 COL6A3P12111 3177 aa18.47■□□□□ 0.55
USB1-208ENST00000563207 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 TMEM232C9JQI7 657 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 ZNF213O14771 459 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 BMP3P12645 472 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 MCCP23508 829 aa18.46■□□□□ 0.55
USB1-208ENST00000563207 IMMTQ16891 758 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms