RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NOL6Q9H6R4 1146 aaKnown RBP8.42□□□□□ -1.06
LINC00557-201ENST00000563184 EMC9Q9Y3B6 208 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 KDM2BQ8NHM5 1336 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
LINC00557-201ENST00000563184 H0Y8X5 98 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 MEIS1O00470 390 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 HYAL3O43820 417 aaPredicted RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 GAB4Q2WGN9 574 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 TSPYL5Q86VY4 417 aaPredicted RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 DAGLBQ8NCG7 672 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 ENOX1Q8TC92 643 aaKnown RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 AKT3Q9Y243 479 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 DIS3Q9Y2L1 958 aaKnown RBP8.41□□□□□ -1.06
LINC00557-201ENST00000563184 SNX11Q9Y5W9 270 aa8.41□□□□□ -1.06
LINC00557-201ENST00000563184 TMEM265A0A087WTH1 108 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 FAM153BP0C7A2 387 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 PPP2R5DQ14738 602 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 CLEC16AQ2KHT3 1053 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 THAP5Q7Z6K1 395 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 PPP1R14AQ96A00 147 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 TCTN2Q96GX1 697 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 DSCC1Q9BVC3 393 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 TRIT1Q9H3H1 467 aaKnown RBP8.4□□□□□ -1.06
LINC00557-201ENST00000563184 GPATCH2Q9NW75 528 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
LINC00557-201ENST00000563184 IQCA1LA6NCM1 817 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 MED26O95402 600 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
LINC00557-201ENST00000563184 PPP2R2AP63151 447 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 SQSTM1Q13501 440 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 C2orf27AQ580R0 203 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
LINC00557-201ENST00000563184 ZNF655Q8N720 491 aaPredicted RBP8.39□□□□□ -1.07
LINC00557-201ENST00000563184 UBE2FQ969M7 185 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 ZDHHC15Q96MV8 337 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
LINC00557-201ENST00000563184 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
LINC00557-201ENST00000563184 AGRPO00253 132 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 GSNP06396 782 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 GRIA2P42262 883 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 FOXB2Q5VYV0 432 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 THAP3Q8WTV1 239 aaPredicted RBP8.38□□□□□ -1.07
LINC00557-201ENST00000563184 MCMBPQ9BTE3 642 aa8.38□□□□□ -1.07
LINC00557-201ENST00000563184 CADPSQ9ULU8 1353 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 KCNH1O95259 989 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 ESR1P03372 595 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 CD97P48960 835 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 PRKCQQ04759 706 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 GRB10Q13322 594 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 YOD1Q5VVQ6 348 aaPredicted RBP8.37□□□□□ -1.07
LINC00557-201ENST00000563184 SDE2Q6IQ49 451 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 ZBTB38Q8NAP3 1195 aaPredicted RBP8.37□□□□□ -1.07
LINC00557-201ENST00000563184 BTN2A2Q8WVV5 523 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
LINC00557-201ENST00000563184 PTCH2Q9Y6C5 1203 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 SHROOM4Q9ULL8 1493 aa8.37□□□□□ -1.07
LINC00557-201ENST00000563184 NOP56O00567 594 aaKnown RBP8.36□□□□□ -1.07
LINC00557-201ENST00000563184 VAMP4O75379 141 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 BMP8BP34820 402 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 CYP4F3Q08477 520 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 BNIP3Q12983 259 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 AOC3Q16853 763 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 GTF2IRD2BQ6EKJ0 949 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
LINC00557-201ENST00000563184 POMZP3Q6PJE2 187 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 GTF2IRD2Q86UP8 949 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 HRASLS5Q96KN8 279 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 AARSD1Q9BTE6 412 aaKnown RBP8.36□□□□□ -1.07
LINC00557-201ENST00000563184 VAV3Q9UKW4 847 aa8.36□□□□□ -1.07
LINC00557-201ENST00000563184 ESYT3A0FGR9 886 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 COBLO75128 1261 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 GRIK1P39086 918 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 CD96P40200 585 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 HSP90AA2PQ14568 343 aaPredicted RBP8.35□□□□□ -1.07
LINC00557-201ENST00000563184 LONRF2Q1L5Z9 754 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
LINC00557-201ENST00000563184 SLC12A9Q9BXP2 914 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
LINC00557-201ENST00000563184 TMEM260Q9NX78 707 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 DUSP13Q9UII6 198 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 GPR55Q9Y2T6 319 aaPredicted RBP8.35□□□□□ -1.07
LINC00557-201ENST00000563184 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
LINC00557-201ENST00000563184 ZNF205O95201 554 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 PRNPP04156 253 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 VAV1P15498 845 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 AMPD2Q01433 879 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 SF1Q15637 639 aaKnown RBP8.34□□□□□ -1.07
LINC00557-201ENST00000563184 DPY19L1Q2PZI1 675 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 RTP2Q5QGT7 225 aa8.34□□□□□ -1.07
LINC00557-201ENST00000563184 NFXL1Q6ZNB6 911 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms