RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 KINO60870 393 aaKnown RBP15.79■□□□□ 0.12
TPM1-215ENST00000558868 CMA1P23946 247 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 TOB1P50616 345 aaPredicted RBP15.79■□□□□ 0.12
TPM1-215ENST00000558868 NPY5RQ15761 445 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 GPKOWQ92917 476 aaPredicted RBP eCLIP15.79■□□□□ 0.12
TPM1-215ENST00000558868 PIGSQ96S52 555 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 CLSTN2Q9H4D0 955 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
TPM1-215ENST00000558868 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 GOPCQ9HD26 462 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 PGAP2Q9UHJ9 254 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 ZBTB21Q9ULJ3 1066 aa15.79■□□□□ 0.12
TPM1-215ENST00000558868 CCDC194A0A1B0GVG4 234 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 SHTN1A0MZ66 631 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 F5H6K3 240 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 ASNSP08243 561 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 SLURP2P0DP57 97 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 CAP2P40123 477 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 KLRC3Q07444 240 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 MAP3K11Q16584 847 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
TPM1-215ENST00000558868 DCAF15Q66K64 600 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 SAMD7Q7Z3H4 446 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 KRT25Q7Z3Z0 450 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 SIAH1Q8IUQ4 282 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 ADGRF4Q8IZF3 695 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
TPM1-215ENST00000558868 GLT8D2Q9H1C3 349 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 GPRC5DQ9NZD1 345 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 HACL1Q9UJ83 578 aa15.78■□□□□ 0.12
TPM1-215ENST00000558868 NR1I2O75469 434 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 APLP1P51693 650 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 TRAF1Q13077 416 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.12
TPM1-215ENST00000558868 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 JMJD4Q9H9V9 463 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 TMX2Q9Y320 296 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
TPM1-215ENST00000558868 BAZ2BQ9UIF8 2168 aaKnown RBP15.76■□□□□ 0.11
TPM1-215ENST00000558868 SMCO2A6NFE2 343 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 ZBTB5O15062 677 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 RAD21O60216 631 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 BMP3P12645 472 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
TPM1-215ENST00000558868 MARCKSP29966 332 aaPredicted RBP15.76■□□□□ 0.11
TPM1-215ENST00000558868 RRP1BQ14684 758 aaKnown RBP15.76■□□□□ 0.11
TPM1-215ENST00000558868 TTC38Q5R3I4 469 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 PIK3AP1Q6ZUJ8 805 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 KCTD1Q719H9 257 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 RASGRP2Q7LDG7 609 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
TPM1-215ENST00000558868 ENGASEQ8NFI3 743 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 PCDHB6Q9Y5E3 794 aa15.76■□□□□ 0.11
TPM1-215ENST00000558868 FAM237AA0A1B0GTK4 181 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 M0R2N6 131 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 NDUFB10O96000 172 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 PTPREP23469 700 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 LMOD1P29536 600 aaPredicted RBP15.75■□□□□ 0.11
TPM1-215ENST00000558868 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
TPM1-215ENST00000558868 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 TEPSINQ96N21 525 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 DEFB129Q9H1M3 183 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 FAM13BQ9NYF5 915 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 PCDHA6Q9UN73 950 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 PCDHA8Q9Y5H6 950 aa15.75■□□□□ 0.11
TPM1-215ENST00000558868 SRPRBQ9Y5M8 271 aaKnown RBP15.75■□□□□ 0.11
TPM1-215ENST00000558868 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 EGFRP00533 1210 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 ADCY7P51828 1080 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 JAG1P78504 1218 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 SNW1Q13573 536 aaKnown RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 RESP18Q5W5W9 173 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 MCTP2Q6DN12 878 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 TYW1BQ6NUM6 668 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 RBM43Q6ZSC3 357 aaKnown RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 FMR1NBQ8N0W7 255 aaPredicted RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 ANP32BQ92688 251 aaKnown RBP15.74■□□□□ 0.11
TPM1-215ENST00000558868 TIGD1Q96MW7 591 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 ZNF341Q9BYN7 854 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 RNF181Q9P0P0 153 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 SBF1O95248 1867 aa15.74■□□□□ 0.11
TPM1-215ENST00000558868 PITPNM2Q9BZ72 1349 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 A0A1B0GVL5 298 aa15.73■□□□□ 0.11
TPM1-215ENST00000558868 USP17L10C9JJH3 530 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms