RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 COPB2P35606 906 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 STAT3P40763 770 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 FGD1P98174 961 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 TMEM132BQ14DG7 1078 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 TMEM67Q5HYA8 995 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 CYB5R4Q7L1T6 521 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 RASGRP2Q7LDG7 609 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 MMP19Q99542 508 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 MROH8Q9H579 483 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 RAVER2Q9HCJ3 691 aaKnown RBP10.52□□□□□ -0.73
SPG11-207ENST00000558138 HOMER2Q9NSB8 354 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
SPG11-207ENST00000558138 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
SPG11-207ENST00000558138 GOLGA8HP0CJ92 632 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 FCER1AP12319 257 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 MCM5P33992 734 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 SLC16A2P36021 539 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 SNAP25P60880 206 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 IRF5Q13568 498 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 KCTD2Q14681 263 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 SYDE2Q5VT97 1194 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 ENAHQ8N8S7 591 aaPredicted RBP10.51□□□□□ -0.73
SPG11-207ENST00000558138 SHCBP1Q8NEM2 672 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 APBA2Q99767 749 aa10.51□□□□□ -0.73
SPG11-207ENST00000558138 COL11A1P12107 1806 aaPredicted RBP10.51□□□□□ -0.73
SPG11-207ENST00000558138 PLXNB2O15031 1838 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 PARP14Q460N5 1801 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 SLC15A5A6NIM6 579 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 PRC1O43663 620 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 HMGCRP04035 888 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 INHAP05111 366 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 FDX1P10109 184 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 PDHBP11177 359 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 ALAS1P13196 640 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 PTPREP23469 700 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 ADORA2AP29274 412 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 KRT32Q14532 448 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 GPATCH4Q5T3I0 446 aaKnown RBP10.5□□□□□ -0.73
SPG11-207ENST00000558138 TTBK2Q6IQ55 1244 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 CATIPQ7Z7H3 387 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 RIOX2Q8IUF8 465 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
SPG11-207ENST00000558138 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 NUP133Q8WUM0 1156 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 DDX11Q96FC9 970 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 RNF208Q9H0X6 261 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 PRR12Q9ULL5 1215 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
SPG11-207ENST00000558138 A0A0G2JMZ2 1700 aa10.5□□□□□ -0.73
SPG11-207ENST00000558138 STRNO43815 780 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 ZNF543Q08ER8 600 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 ASPRV1Q53RT3 343 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 MFSD14CQ5VZR4 134 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 POTEEQ6S8J3 1075 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 SYNE3Q6ZMZ3 975 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 ARMC5Q96C12 935 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 ZNF333Q96JL9 665 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 NEK1Q96PY6 1258 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 SLC38A10Q9HBR0 1119 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 VAT1LQ9HCJ6 419 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 FBXO40Q9UH90 709 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
SPG11-207ENST00000558138 RLFQ13129 1914 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 PLA2G6O60733 806 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 EIF5BO60841 1220 aaKnown RBP10.48□□□□□ -0.73
SPG11-207ENST00000558138 CCL5P13501 91 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 CNGA1P29973 690 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 NOVP48745 357 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 OAZ1P54368 228 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 GRB14Q14449 540 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 MORN1Q5T089 497 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 MB21D2Q8IYB1 491 aaPredicted RBP10.48□□□□□ -0.73
SPG11-207ENST00000558138 CTCFLQ8NI51 663 aaPredicted RBP10.48□□□□□ -0.73
SPG11-207ENST00000558138 TMEM87BQ96K49 555 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 ZNF214Q9UL59 606 aaPredicted RBP10.48□□□□□ -0.73
SPG11-207ENST00000558138 ADAMTS5Q9UNA0 930 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 DOCK3Q8IZD9 2030 aa10.48□□□□□ -0.73
SPG11-207ENST00000558138 PGK2P07205 417 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
SPG11-207ENST00000558138 MTFR1Q15390 333 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 SEC23AQ15436 765 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 CCL14Q16627 93 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 USH1GQ495M9 461 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 NSMFQ6X4W1 530 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 CHST13Q8NET6 341 aa10.47□□□□□ -0.73
SPG11-207ENST00000558138 REPS2Q8NFH8 660 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms