RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CCSAPQ6IQ19 270 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-221ENST00000556571 MFSD5Q6N075 450 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 MAMDC4Q6UXC1 1216 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-221ENST00000556571 TIFAQ96CG3 184 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 SLF1Q9BQI6 1058 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 BOLA2Q9H3K6 86 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 SYNRGQ9UMZ2 1314 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.12
ACTN1-221ENST00000556571 MROH7Q68CQ1 1323 aa14.27□□□□□ -0.12
ACTN1-221ENST00000556571 RAB11FIP3O75154 756 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 DUSP11O75319 330 aaKnown RBP14.27□□□□□ -0.13
ACTN1-221ENST00000556571 ATP5JP18859 108 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 PPIGQ13427 754 aaKnown RBP eCLIP14.27□□□□□ -0.132e-13■■□□□ 13.5
ACTN1-221ENST00000556571 SLFNL1Q499Z3 407 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
ACTN1-221ENST00000556571 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 PCSK9Q8NBP7 692 aaKnown RBP14.27□□□□□ -0.13
ACTN1-221ENST00000556571 PANK1Q8TE04 598 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.133e-11■■□□□ 14.4
ACTN1-221ENST00000556571 TBX21Q9UL17 535 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 SLC4A4Q9Y6R1 1079 aa14.27□□□□□ -0.13
ACTN1-221ENST00000556571 NCOR1O75376 2440 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 DNAJC25-GNG10A0A024R161 153 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-221ENST00000556571 CDK7P50613 346 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-221ENST00000556571 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
ACTN1-221ENST00000556571 USP38Q8NB14 1042 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 HAUS7Q99871 368 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
ACTN1-221ENST00000556571 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
ACTN1-221ENST00000556571 ZHX1Q9UKY1 873 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-221ENST00000556571 F5H6K3 240 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 ZBED4O75132 1171 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-221ENST00000556571 MS4A1P11836 297 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 KLRC3Q07444 240 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 C16orf59Q7L2K0 433 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 TMEM199Q8N511 208 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 VTI1AQ96AJ9 217 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 GAS2L1Q99501 681 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-221ENST00000556571 ABHD16BQ9H3Z7 469 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-221ENST00000556571 RIPK3Q9Y572 518 aa14.25□□□□□ -0.13
ACTN1-221ENST00000556571 CTDP1Q9Y5B0 961 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-221ENST00000556571 MYO9BQ13459 2157 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-221ENST00000556571 MYADML2A6NDP7 307 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 ARVCFO00192 962 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 TNFRSF10AO00220 468 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 ASGR1P07306 291 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 TMEM240Q5SV17 173 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 CCDC129Q6ZRS4 1044 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
ACTN1-221ENST00000556571 NUP88Q99567 741 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-221ENST00000556571 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 UPF3AQ9H1J1 476 aaKnown RBP14.24□□□□□ -0.13
ACTN1-221ENST00000556571 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-221ENST00000556571 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
ACTN1-221ENST00000556571 PARP14Q460N5 1801 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 TLR3O15455 904 aaKnown RBP14.23□□□□□ -0.13
ACTN1-221ENST00000556571 NDUFB10O96000 172 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 CHGBP05060 677 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 CSF2RAP15509 400 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 RASA1P20936 1047 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 GJA9P57773 515 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 PSRC1Q6PGN9 363 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-221ENST00000556571 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 CPXCR1Q8N123 301 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 ANKRD35Q8N283 1001 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 ATXN2LQ8WWM7 1075 aaKnown RBP14.23□□□□□ -0.13
ACTN1-221ENST00000556571 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
ACTN1-221ENST00000556571 MKNK2Q9HBH9 465 aa14.23□□□□□ -0.13
ACTN1-221ENST00000556571 MYH8P13535 1937 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.133e-7■■□□□ 13
ACTN1-221ENST00000556571 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 ZNF365Q70YC5 407 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 CHST13Q8NET6 341 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 STRBPQ96SI9 672 aaKnown RBP14.22□□□□□ -0.13
ACTN1-221ENST00000556571 SLC38A10Q9HBR0 1119 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
ACTN1-221ENST00000556571 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 MSRAQ9UJ68 235 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 MUC3AQ02505 3323 aa14.22□□□□□ -0.13
ACTN1-221ENST00000556571 COL11A1P12107 1806 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms