RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 A0A1W2PQY0 241 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 RNF113AO15541 343 aaKnown RBP18.48■□□□□ 0.55
BRF1-220ENST00000552127 TIMP1P01033 207 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 ZFYP08048 801 aaPredicted RBP18.48■□□□□ 0.55
BRF1-220ENST00000552127 APPBP2Q92624 585 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 C11orf16Q9NQ32 467 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 XPNPEP3Q9NQH7 507 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
BRF1-220ENST00000552127 MSRAQ9UJ68 235 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
BRF1-220ENST00000552127 GPR37L1O60883 481 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 COBLO75128 1261 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 USP14P54578 494 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 C12orf60Q5U649 245 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 MFSD5Q6N075 450 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 MICALL1Q8N3F8 863 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 TOX2Q96NM4 488 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 KIAA1683Q9H0B3 1180 aa18.47■□□□□ 0.55
BRF1-220ENST00000552127 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 FAM86C2PA6NEL3 165 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 SPDYE16A6NNV3 312 aaPredicted RBP18.46■□□□□ 0.55
BRF1-220ENST00000552127 DCDC2CA8MYV0 355 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 USP17L12C9JPN9 530 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 USP17L21D6R901 530 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 MPHOSPH10O00566 681 aaKnown RBP18.46■□□□□ 0.55
BRF1-220ENST00000552127 STRNO43815 780 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 PGK1P00558 417 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 SEPT2Q15019 361 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 RAB30Q15771 203 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 LRRFIP1Q32MZ4 808 aaKnown RBP18.46■□□□□ 0.55
BRF1-220ENST00000552127 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 RNF180Q86T96 592 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 ACER1Q8TDN7 264 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
BRF1-220ENST00000552127 NKX2-4Q9H2Z4 354 aa18.46■□□□□ 0.55
BRF1-220ENST00000552127 ARPP21Q9UBL0 812 aaPredicted RBP18.46■□□□□ 0.55
BRF1-220ENST00000552127 TRANK1O15050 2925 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 RARBP10826 455 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 VCAM1P19320 739 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 PPIGQ13427 754 aaKnown RBP eCLIP18.45■□□□□ 0.544e-6■■□□□ 13.6
BRF1-220ENST00000552127 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 TMEM179Q6ZVK1 233 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 KHSRPQ92945 711 aaKnown RBP eCLIP18.45■□□□□ 0.54
BRF1-220ENST00000552127 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 MOV10L1Q9BXT6 1211 aaKnown RBP18.45■□□□□ 0.54
BRF1-220ENST00000552127 SLC28A3Q9HAS3 691 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
BRF1-220ENST00000552127 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
BRF1-220ENST00000552127 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 M0R2C6 588 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 GPAA1O43292 621 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 ACRP10323 421 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 CSF2RAP15509 400 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 CTR9Q6PD62 1173 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 C16orf86Q6ZW13 317 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 FSD1Q9BTV5 496 aa18.44■□□□□ 0.54
BRF1-220ENST00000552127 YBX2Q9Y2T7 364 aaKnown RBP18.44■□□□□ 0.54
BRF1-220ENST00000552127 ROBO3Q96MS0 1386 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 AKR1B1P15121 316 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 CDK8P49336 464 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
BRF1-220ENST00000552127 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 MAML3Q96JK9 1138 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 SLC5A4Q9NY91 659 aa18.43■□□□□ 0.54
BRF1-220ENST00000552127 GNAT2P19087 354 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 ERCC3P19447 782 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 MRE11P49959 708 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 PSRC1Q6PGN9 363 aaPredicted RBP18.42■□□□□ 0.54
BRF1-220ENST00000552127 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 CCDC17Q96LX7 622 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 RPAP3Q9H6T3 665 aaPredicted RBP18.42■□□□□ 0.54
BRF1-220ENST00000552127 STARD7Q9NQZ5 370 aa18.42■□□□□ 0.54
BRF1-220ENST00000552127 ZNFX1Q9P2E3 1918 aaKnown RBP18.42■□□□□ 0.54
BRF1-220ENST00000552127 A0A1W2PRG0 241 aa18.41■□□□□ 0.54
BRF1-220ENST00000552127 ICA1Q05084 483 aa18.41■□□□□ 0.54
BRF1-220ENST00000552127 CLEC10AQ8IUN9 316 aa18.41■□□□□ 0.54
BRF1-220ENST00000552127 SPATC1LQ9H0A9 340 aa18.41■□□□□ 0.54
BRF1-220ENST00000552127 EPB41L4AQ9HCS5 686 aaPredicted RBP18.41■□□□□ 0.54
BRF1-220ENST00000552127 PRRC2BQ5JSZ5 2229 aaKnown RBP18.4■□□□□ 0.54
BRF1-220ENST00000552127 TLL1O43897 1013 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 ACLYP53396 1101 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 PDE1AP54750 535 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 SHCBP1Q8NEM2 672 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 LENG1Q96BZ8 264 aaPredicted RBP18.4■□□□□ 0.54
BRF1-220ENST00000552127 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
BRF1-220ENST00000552127 SH2D4AQ9H788 454 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 ARHGEF10LQ9HCE6 1279 aa18.4■□□□□ 0.54
BRF1-220ENST00000552127 ADAMTS4O75173 837 aa18.39■□□□□ 0.53
BRF1-220ENST00000552127 TDO2P48775 406 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms