RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HDXQ7Z353 690 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 NOP9Q86U38 636 aaKnown RBP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 REXO1Q8N1G1 1221 aaKnown RBP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 DTWD1Q8N5C7 304 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 OR6P1Q8NGX9 317 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 FBXO27Q8NI29 283 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ZCRB1Q8TBF4 217 aaKnown RBP3.3□□□□□ -1.88
CPSF6-207ENST00000551516 GPBAR1Q8TDU6 330 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 GAL3ST3Q96A11 431 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ELMO3Q96BJ8 720 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ANAPC16Q96DE5 110 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 USP26Q9BXU7 913 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 TRIM55Q9BYV6 548 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 BRMS1Q9HCU9 246 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 RAD18Q9NS91 495 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ATG3Q9NT62 314 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ASAP1Q9ULH1 1129 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 BTAF1O14981 1849 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 TUBGCP6Q96RT7 1819 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 RGPD5Q99666 1765 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 ADAMTS7Q9UKP4 1686 aa3.3□□□□□ -1.88
CPSF6-207ENST00000551516 C10orf71Q711Q0 1435 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 RTL1A6NKG5 1358 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 KIF24Q5T7B8 1368 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PLEKHG2Q9H7P9 1386 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 WASHC2AQ641Q2 1341 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 ST20-MTHFSA0A0A6YYL1 179 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 SPDYE3A6NKU9 549 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PIK3R2O00459 728 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 GRIN3BO60391 1043 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 WFS1O76024 890 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 ECEL1O95672 775 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 GYS1P13807 737 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 NID1P14543 1247 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 LIG1P18858 919 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CD68P34810 354 aaPredicted RBP3.29□□□□□ -1.88
CPSF6-207ENST00000551516 RAC1P63000 192 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PTPN11Q06124 597 aaPredicted RBP3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PDE4BQ07343 736 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 DDR1Q08345 913 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 SETDB1Q15047 1291 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 RRS1Q15050 365 aaKnown RBP3.29□□□□□ -1.88
CPSF6-207ENST00000551516 NFE2L2Q16236 605 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 DUOXA2Q1HG44 320 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CCDC144BQ3MJ40 725 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 TNNI3KQ59H18 835 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 EXOSC6Q5RKV6 272 aaKnown RBP3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CCDC81Q6ZN84 652 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 ANKS3Q6ZW76 656 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 OSBPL2Q9H1P3 480 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 ZSWIM4Q9H7M6 989 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CACNA2D2Q9NY47 1150 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 SIRPGQ9P1W8 387 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 POLKQ9UBT6 870 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PRKAG3Q9UGI9 489 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 CCNL1Q9UK58 526 aaPredicted RBP3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PPT2Q9UMR5 302 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 PCDHB14Q9Y5E9 798 aa3.29□□□□□ -1.88
CPSF6-207ENST00000551516 SNED1Q8TER0 1413 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 PALLDQ8WX93 1383 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 IGSF1Q8N6C5 1336 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 ZNF862O60290 1169 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 AOC2O75106 756 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 ATE1O95260 518 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 CANXP27824 592 aaKnown RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 GMPRP36959 345 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 GIPRP48546 466 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 DGKGP49619 791 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 HTRA3P83110 453 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 CLCQ05315 142 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 TRIM28Q13263 835 aaKnown RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 INPP5AQ14642 412 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 GPR162Q16538 588 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 KIF4BQ2VIQ3 1234 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 LRRFIP1Q32MZ4 808 aaKnown RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 WIPI1Q5MNZ9 446 aaPredicted RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 INTS5Q6P9B9 1019 aaKnown RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 FBXO11Q86XK2 927 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 SVOPQ8N4V2 548 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 USHBP1Q8N6Y0 703 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 GALNT11Q8NCW6 608 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 MKL1Q969V6 931 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 MRFAP1L1Q96HT8 127 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 SHDQ96IW2 340 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 DCAF5Q96JK2 942 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 NRSN2Q9GZP1 204 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 CCDC86Q9H6F5 360 aaKnown RBP3.28□□□□□ -1.88
CPSF6-207ENST00000551516 EHMT1Q9H9B1 1298 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 NMRK2Q9NPI5 230 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 PICK1Q9NRD5 415 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 TFCP2L1Q9NZI6 479 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 ZNRF3Q9ULT6 936 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 TACC3Q9Y6A5 838 aa3.28□□□□□ -1.88
CPSF6-207ENST00000551516 SMG6Q86US8 1419 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 ROCK2O75116 1388 aaKnown RBP3.27□□□□□ -1.89
CPSF6-207ENST00000551516 SYNGAP1Q96PV0 1343 aa3.27□□□□□ -1.89
CPSF6-207ENST00000551516 A0A0A0MRY4 1105 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms