RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 TRIM66O15016 1216 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 LDHBP07195 334 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 TCP1P17987 556 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 TECP42680 631 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 E2F4Q16254 413 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 CEP85LQ5SZL2 805 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC25Q86WR0 208 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 ANKS4BQ8N8V4 417 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 CNOT6LQ96LI5 555 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 ARHGEF28Q8N1W1 1705 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 H2AFXP16104 143 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 GUCY1A2P33402 732 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 VSNL1P62760 191 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 RABL6Q3YEC7 729 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 GSPT2Q8IYD1 628 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 FHOD1Q9Y613 1164 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 EIF6P56537 245 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 GSTO1P78417 241 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 FOXO4P98177 505 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 SLC7A5Q01650 507 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 GUCY2DQ02846 1103 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 UBE4AQ14139 1066 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 USP49Q70CQ1 688 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 TC2NQ8N9U0 490 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 HDAC6Q9UBN7 1215 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 TUBE1Q9UJT0 475 aa11.36□□□□□ -0.59
SMARCC2-209ENST00000550164 A6NNZ2 444 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 CETN1Q12798 172 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 TUBB8Q3ZCM7 444 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 HERC4Q5GLZ8 1057 aaPredicted RBP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 ZNF658Q5TYW1 1059 aaPredicted RBP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 ABHD10Q9NUJ1 306 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 JRKLQ9Y4A0 524 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 GOLGA8HP0CJ92 632 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 ARHGAP25P42331 645 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 RPS6KA1Q15418 735 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 SFMBT2Q5VUG0 894 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 HEG1Q9ULI3 1381 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 GOLGA8KD6RF30 607 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 RASSF7Q02833 373 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 CUL4BQ13620 913 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 ASIC2Q16515 512 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 REXO1L1PQ8IX06 675 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC65Q8IXS2 484 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 ERMNQ8TAM6 284 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 TBC1D5Q92609 795 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 SEC31BQ9NQW1 1179 aa11.35□□□□□ -0.59
SMARCC2-209ENST00000550164 TRIM49BA6NDI0 452 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 VIMP08670 466 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 LONP1P36776 959 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 ANTXR2P58335 489 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 TTLL11Q8NHH1 800 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 LRRC45Q96CN5 670 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 PAIP2Q9BPZ3 127 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 SUGCTQ9HAC7 445 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 KRT71Q3SY84 523 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC26Q8TAB7 109 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 TCHHQ07283 1943 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 EIF3CLB5ME19 914 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 KIF4AO95239 1232 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 RAD9BQ6WBX8 426 aa11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 EIF3CQ99613 913 aaKnown RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
SMARCC2-209ENST00000550164 NEURL4Q96JN8 1562 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 SMCO2A6NFE2 343 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 KCNK3O14649 394 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 CETN3O15182 167 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 EHHADHQ08426 723 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 CALCRLQ16602 461 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 CUL5Q93034 780 aa11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 NHEJ1Q9H9Q4 299 aaPredicted RBP11.33□□□□□ -0.59
SMARCC2-209ENST00000550164 BTG4Q9NY30 223 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms