RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 CHRNDQ07001 517 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 CYP26C1Q6V0L0 522 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 IQUBQ8NA54 791 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 CHP1Q99653 195 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 RIOK1Q9BRS2 568 aaKnown RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 DUOX1Q9NRD9 1551 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 TPD52L2O43399 206 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 MARCH6O60337 910 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 NELFBQ8WX92 580 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 RBM28Q9NW13 759 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 VPS18Q9P253 973 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 MAPK8IP1Q9UQF2 711 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE15A4D2H0 777 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 KCNJ18B7U540 433 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE8P0CG41 777 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 KRT9P35527 623 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 AMPD2Q01433 879 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 EVX2Q03828 476 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 PAK1Q13153 545 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 KCNJ12Q14500 433 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 WHAMMP3Q1A5X7 153 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 TMTC3Q6ZXV5 915 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE6Q86UF2 777 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE4Q8IX94 777 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 NOA1Q8NC60 698 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 CICQ96RK0 1608 aaPredicted RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 COL4A1P02462 1669 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 ERLIN1O75477 346 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 MCM7P33993 719 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 IGHMBP2P38935 993 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 GDAQ9Y2T3 454 aa11.59□□□□□ -0.55
ERBB3-214ENST00000550070 REXO2Q9Y3B8 237 aaKnown RBP11.59□□□□□ -0.55
ERBB3-214ENST00000550070 TESPA1A2RU30 521 aaPredicted RBP11.58□□□□□ -0.56
ERBB3-214ENST00000550070 PRCPP42785 496 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 GYG1P46976 350 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 TUBB4BP68371 445 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 SATB1Q01826 763 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 ZNF658Q5TYW1 1059 aaPredicted RBP11.58□□□□□ -0.56
ERBB3-214ENST00000550070 MSL3Q8N5Y2 521 aaKnown RBP11.58□□□□□ -0.56
ERBB3-214ENST00000550070 MYO1AQ9UBC5 1043 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 MYO6Q9UM54 1294 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 DISP2A7MBM2 1401 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 CACNA1SQ13698 1873 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 NMT2O60551 498 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 RPN1P04843 607 aaKnown RBP11.58□□□□□ -0.56
ERBB3-214ENST00000550070 SPAG1Q07617 926 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 IQCA1Q86XH1 822 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
ERBB3-214ENST00000550070 TRIM49BA6NDI0 452 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 FGRP09769 529 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 CALM1P0DP23 149 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 CALM2P0DP24 149 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 CALM3P0DP25 149 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 UBXN1Q04323 297 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 TRIM14Q14142 442 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 CASP8Q14790 479 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 ZNF384Q8TF68 577 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 FEZ2Q9UHY8 353 aaPredicted RBP11.57□□□□□ -0.56
ERBB3-214ENST00000550070 GUCA1BQ9UMX6 200 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 FAN1Q9Y2M0 1017 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 PPME1Q9Y570 386 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 EPN1Q9Y6I3 576 aaPredicted RBP11.57□□□□□ -0.56
ERBB3-214ENST00000550070 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
ERBB3-214ENST00000550070 TTC26A0AVF1 554 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 DDAH1O94760 285 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 NDUFA10O95299 355 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 EIF5P55010 431 aaKnown RBP11.57□□□□□ -0.56
ERBB3-214ENST00000550070 NLRP5P59047 1200 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 MTA1Q13330 715 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 TFR2Q9UP52 801 aa11.57□□□□□ -0.56
ERBB3-214ENST00000550070 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 GOLGA6CA6NDK9 693 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
ERBB3-214ENST00000550070 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
ERBB3-214ENST00000550070 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
ERBB3-214ENST00000550070 GOLGA6DP0CG33 693 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 SCP2P22307 547 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 ACTN2P35609 894 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 PMS1P54277 932 aaKnown RBP11.56□□□□□ -0.56
ERBB3-214ENST00000550070 C4orf32Q8N8J7 132 aa11.56□□□□□ -0.56
ERBB3-214ENST00000550070 ANKRD20A12PQ8NF67 263 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms