RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 AIFM3Q96NN9 605 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 MTMR6Q9Y217 621 aa9.42□□□□□ -0.9
DEPDC4-207ENST00000549249 PARP14Q460N5 1801 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 A0A1W2PRG0 241 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 STX6O43752 255 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 PDHBP11177 359 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 INPP5BP32019 993 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 NUCB2P80303 420 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 NBR1Q14596 966 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 CDC37L1Q7L3B6 337 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 CCDC84Q86UT8 332 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 MKL1Q969V6 931 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 CHMP4CQ96CF2 233 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 KANSL2Q9H9L4 492 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 ZNF112Q9UJU3 913 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
DEPDC4-207ENST00000549249 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 USP17L5A8MUK1 530 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CYTH3O43739 400 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CDKL5O76039 1030 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 GOLGA8HP0CJ92 632 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 PTPN5P54829 565 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 PPP2R5BQ15173 497 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 PKN1Q16512 942 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 LARP1BQ659C4 914 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 DCAF15Q66K64 600 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CPLX2Q6PUV4 134 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 ACER1Q8TDN7 264 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 ZC3H15Q8WU90 426 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 DCPSQ96C86 337 aaKnown RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 EPAS1Q99814 870 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 SLC26A6Q9BXS9 759 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 ZNF341Q9BYN7 854 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 GLIS2Q9BZE0 524 aaPredicted RBP9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
DEPDC4-207ENST00000549249 SMCHD1A6NHR9 2005 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 hCG_1642624A0A1W2PR95 340 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 VPS37CA5D8V6 355 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 F13A1P00488 732 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 KIF5BP33176 963 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 ECE1P42892 770 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 GUCY1B3Q02153 619 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 EAPPQ56P03 285 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 KIAA1755Q5JYT7 1200 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 OTUD7BQ6GQQ9 843 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 KRT26Q7Z3Y9 468 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 CPVLQ9H3G5 476 aa9.39□□□□□ -0.91
DEPDC4-207ENST00000549249 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 PRPF3O43395 683 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 USP2O75604 605 aaPredicted RBP9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 DEXIO95424 95 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 NDUFB10O96000 172 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 ASNSP08243 561 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 PARP1P09874 1014 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 PDCP20941 246 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 GNAQP50148 359 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 ZNF543Q08ER8 600 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 RESTQ13127 1097 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 ASPRV1Q53RT3 343 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 NOL9Q5SY16 702 aaKnown RBP9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 SLFN13Q68D06 897 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 TTBK2Q6IQ55 1244 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 USP48Q86UV5 1035 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 GMCL1P1Q8NEA9 526 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 HOOK2Q96ED9 719 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms