RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CCT2P78371 535 aaKnown RBP19■□□□□ 0.63
LIMS2-217ENST00000545738 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
LIMS2-217ENST00000545738 STK3Q13188 491 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 JMYQ8N9B5 988 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 REPS2Q8NFH8 660 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 KIFC2Q96AC6 838 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 ZCCHC17Q9NP64 241 aaKnown RBP19■□□□□ 0.63
LIMS2-217ENST00000545738 TSKSQ9UJT2 592 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
LIMS2-217ENST00000545738 ADAMTS5Q9UNA0 930 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 ZSWIM8A7E2V4 1837 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 KLRF2D3W0D1 207 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 CAP1Q01518 475 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 COG2Q14746 738 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 ASPRV1Q53RT3 343 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 SRBD1Q8N5C6 995 aaKnown RBP19■□□□□ 0.63
LIMS2-217ENST00000545738 SLF1Q9BQI6 1058 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 WBP1LQ9NX94 342 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 BTBD7Q9P203 1132 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 RBPJLQ9UBG7 517 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 FEM1BQ9UK73 627 aa19■□□□□ 0.63
LIMS2-217ENST00000545738 GOLGA8AA7E2F4 631 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 CA12O43570 354 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 PPFIA3O75145 1194 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 FUT2Q10981 343 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 GPATCH4Q5T3I0 446 aaKnown RBP18.99■□□□□ 0.63
LIMS2-217ENST00000545738 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
LIMS2-217ENST00000545738 MAP3K14Q99558 947 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 CPA4Q9UI42 421 aa18.99■□□□□ 0.63
LIMS2-217ENST00000545738 VWA5AO00534 786 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 PLA2G6O60733 806 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 METAP2P50579 478 aaKnown RBP eCLIP18.98■□□□□ 0.63
LIMS2-217ENST00000545738 SCRN1Q12765 414 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 Q3C1V9 767 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 LBX2Q6XYB7 198 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 ADGRF4Q8IZF3 695 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 NECAB1Q8N987 351 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 ZNF274Q96GC6 653 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-217ENST00000545738 PARK7Q99497 189 aaKnown RBP18.98■□□□□ 0.63
LIMS2-217ENST00000545738 BRCA2P51587 3418 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 ZNF536O15090 1300 aa18.98■□□□□ 0.63
LIMS2-217ENST00000545738 TLR2O60603 784 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 OSBPP22059 807 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 PABPC4Q13310 644 aaKnown RBP eCLIP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 TMEM132BQ14DG7 1078 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 NTRK3Q16288 839 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 RTN1Q16799 776 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 SYDE2Q5VT97 1194 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 OTUD7BQ6GQQ9 843 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 TMTC3Q6ZXV5 915 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CCDC82Q8N4S0 544 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 ANKRD13CQ8N6S4 541 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 PRPF38AQ8NAV1 312 aaKnown RBP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CTCFLQ8NI51 663 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 JMJD4Q9H9V9 463 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 PNMA3Q9UL41 463 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CALM1P0DP23 149 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CALM2P0DP24 149 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CALM3P0DP25 149 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 BCRP11274 1271 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 RCAN1P53805 252 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 IKQ13123 557 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 C17orf99Q6UX52 265 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 CFHR5Q9BXR6 569 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 ZNF214Q9UL59 606 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-217ENST00000545738 MYH6P13533 1939 aa18.97■□□□□ 0.63
LIMS2-217ENST00000545738 MYPNQ86TC9 1320 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 CNTNAP5Q8WYK1 1306 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 hCG_1642624A0A1W2PR95 340 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
LIMS2-217ENST00000545738 ANKRD1Q15327 319 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 SYNE3Q6ZMZ3 975 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 FAM160B2Q86V87 743 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 PAGR1Q9BTK6 254 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 RIOX1Q9H6W3 641 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 VAT1LQ9HCJ6 419 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 HOXC10Q9NYD6 342 aa18.96■□□□□ 0.63
LIMS2-217ENST00000545738 PFKFB2O60825 505 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 PPP1R11O60927 126 aaPredicted RBP18.95■□□□□ 0.62
LIMS2-217ENST00000545738 CTDNEP1O95476 244 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 ALDH1A1P00352 501 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 CHURC1Q8WUH1 139 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 MTMR8Q96EF0 704 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 RANBP17Q9H2T7 1088 aaKnown RBP18.95■□□□□ 0.62
LIMS2-217ENST00000545738 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
LIMS2-217ENST00000545738 CTGFP29279 349 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 RIPK3Q9Y572 518 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 DOCK3Q8IZD9 2030 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 ST18O60284 1047 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 KIF5BP33176 963 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 CCDC174Q6PII3 467 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 PHKBQ93100 1093 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 GTF3C6Q969F1 213 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
LIMS2-217ENST00000545738 PIGSQ96S52 555 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms