RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PBX4Q9BYU1 374 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 CHD9Q3L8U1 2897 aa19.39■□□□□ 0.69
DDX55-212ENST00000544738 BAZ2AQ9UIF9 1905 aaKnown RBP19.39■□□□□ 0.69
DDX55-212ENST00000544738 A0A1W2PQ45 241 aaPredicted RBP19.38■□□□□ 0.69
DDX55-212ENST00000544738 A0A1W2PQY0 241 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 DCDC2CA8MYV0 355 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 TSHZ3Q63HK5 1081 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 MAML3Q96JK9 1138 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 NECAB3Q96P71 396 aaPredicted RBP19.38■□□□□ 0.69
DDX55-212ENST00000544738 TANGO6Q9C0B7 1094 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 TMX2Q9Y320 296 aa19.38■□□□□ 0.69
DDX55-212ENST00000544738 GSG1L2A8MUP6 293 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 TIMP1P01033 207 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 ADGRE1Q14246 886 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 OSBP2Q969R2 916 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 C1QTNF1Q9BXJ1 281 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 MROH8Q9H579 483 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 MYH8P13535 1937 aa19.37■□□□□ 0.69
DDX55-212ENST00000544738 SMCHD1A6NHR9 2005 aa19.36■□□□□ 0.69
DDX55-212ENST00000544738 AAMPQ13685 434 aa19.36■□□□□ 0.69
DDX55-212ENST00000544738 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
DDX55-212ENST00000544738 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
DDX55-212ENST00000544738 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
DDX55-212ENST00000544738 VCPKMTQ9H867 229 aa19.36■□□□□ 0.69
DDX55-212ENST00000544738 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 GPAA1O43292 621 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 FCER1AP12319 257 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
DDX55-212ENST00000544738 MX1P20591 662 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 TMEM240Q5SV17 173 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 C16orf59Q7L2K0 433 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 ANKRD33Q7Z3H0 272 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 PI4K2BQ8TCG2 481 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 TOX2Q96NM4 488 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 ZNF287Q9HBT7 754 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 STARD7Q9NQZ5 370 aa19.35■□□□□ 0.69
DDX55-212ENST00000544738 XIRP2A4UGR9 3374 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 WDR46O15213 610 aaKnown RBP19.34■□□□□ 0.69
DDX55-212ENST00000544738 ACRP10323 421 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 PPIGQ13427 754 aaKnown RBP eCLIP19.34■□□□□ 0.694e-6■□□□□ 11.2
DDX55-212ENST00000544738 MFSD5Q6N075 450 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 LENG1Q96BZ8 264 aaPredicted RBP19.34■□□□□ 0.69
DDX55-212ENST00000544738 TSPYL2Q9H2G4 693 aaPredicted RBP19.34■□□□□ 0.69
DDX55-212ENST00000544738 MKNK2Q9HBH9 465 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
DDX55-212ENST00000544738 MINDY4BA8MYZ0 360 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 PATL2C9JE40 543 aaKnown RBP19.33■□□□□ 0.68
DDX55-212ENST00000544738 FLOT1O75955 427 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 APPP05067 770 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
DDX55-212ENST00000544738 DSG3P32926 999 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 ACLYP53396 1101 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
DDX55-212ENST00000544738 ANKRD45Q5TZF3 282 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 CLEC10AQ8IUN9 316 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 SPICE1Q8N0Z3 855 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
DDX55-212ENST00000544738 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 NACAP1Q9BZK3 213 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 GOPCQ9HD26 462 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 NRBP1Q9UHY1 535 aa19.33■□□□□ 0.68
DDX55-212ENST00000544738 PGK2P07205 417 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 TDO2P48775 406 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 KIAA1755Q5JYT7 1200 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 ZNF365Q70YC5 407 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
DDX55-212ENST00000544738 TINF2Q9BSI4 451 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 CHD7Q9P2D1 2997 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
DDX55-212ENST00000544738 M0R2C6 588 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 BMP1P13497 986 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 CSF2RAP15509 400 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 RASA1P20936 1047 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 VTI1AQ96AJ9 217 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 ATG4CQ96DT6 458 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 MMP19Q99542 508 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 TSEN34Q9BSV6 310 aaKnown RBP19.31■□□□□ 0.68
DDX55-212ENST00000544738 NKX2-4Q9H2Z4 354 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 TBX21Q9UL17 535 aa19.31■□□□□ 0.68
DDX55-212ENST00000544738 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
DDX55-212ENST00000544738 AKR1A1P14550 325 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 TFF2Q03403 129 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 RAB30Q15771 203 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 KCNA10Q16322 511 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 ZMYM1Q5SVZ6 1142 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 RASIP1Q5U651 963 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 IFNL3Q8IZI9 196 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 TMEM199Q8N511 208 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 SLC28A3Q9HAS3 691 aa19.3■□□□□ 0.68
DDX55-212ENST00000544738 EPB41L4AQ9HCS5 686 aaPredicted RBP19.3■□□□□ 0.68
DDX55-212ENST00000544738 CXXC1Q9P0U4 656 aaPredicted RBP19.3■□□□□ 0.68
DDX55-212ENST00000544738 NYAP2Q9P242 653 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms