RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 SLF1Q9BQI6 1058 aa13.57□□□□□ -0.24
C1RL-209ENST00000543941 RAVER2Q9HCJ3 691 aaKnown RBP13.57□□□□□ -0.24
C1RL-209ENST00000543941 LCTP09848 1927 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 DNM1LO00429 736 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 ERC2O15083 957 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 ADCY6O43306 1168 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 LRRC41Q15345 812 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 SNRNP48Q6IEG0 339 aaKnown RBP13.56□□□□□ -0.24
C1RL-209ENST00000543941 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 SH3RF1Q7Z6J0 888 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
C1RL-209ENST00000543941 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
C1RL-209ENST00000543941 TINF2Q9BSI4 451 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 DDX49Q9Y6V7 483 aaKnown RBP13.56□□□□□ -0.24
C1RL-209ENST00000543941 ZNF536O15090 1300 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
C1RL-209ENST00000543941 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 NOVP48745 357 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 RTP1P59025 263 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 SNAP25P60880 206 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 CPXCR1Q8N123 301 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
C1RL-209ENST00000543941 FERMT2Q96AC1 680 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 KIFC2Q96AC6 838 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 NAPBQ9H115 298 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
C1RL-209ENST00000543941 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
C1RL-209ENST00000543941 MSCO60682 206 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 TTLL1O95922 423 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 PGK1P00558 417 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 FGRP09769 529 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 PTGS1P23219 599 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 ITGB8P26012 769 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 ADCYAP1R1P41586 468 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 SNX17Q15036 470 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 Q7L0L9 218 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
C1RL-209ENST00000543941 GMCL1P1Q8NEA9 526 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 ANAPC4Q9UJX5 808 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 ASTN1O14525 1302 aa13.54□□□□□ -0.24
C1RL-209ENST00000543941 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 ADAMTS4O75173 837 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 FGAP02671 866 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 MCCP23508 829 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
C1RL-209ENST00000543941 KCTD2Q14681 263 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TRIM60Q495X7 471 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
C1RL-209ENST00000543941 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 AGBL1Q96MI9 1066 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 TEX13BQ9BXU2 312 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
C1RL-209ENST00000543941 KATNBL1Q9H079 304 aa13.53□□□□□ -0.24
C1RL-209ENST00000543941 BMP3P12645 472 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 CNTN2Q02246 1040 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 ALX1Q15699 326 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
C1RL-209ENST00000543941 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 MAMDC4Q6UXC1 1216 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 TDHQ8IZJ6 230 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 ARRDC4Q8NCT1 418 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 PURBQ96QR8 312 aaKnown RBP13.52□□□□□ -0.25
C1RL-209ENST00000543941 RWDD1Q9H446 243 aaPredicted RBP13.52□□□□□ -0.25
C1RL-209ENST00000543941 FEM1BQ9UK73 627 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 PHF24Q9UPV7 400 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.25
C1RL-209ENST00000543941 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 CTAGE5O15320 804 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
C1RL-209ENST00000543941 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
C1RL-209ENST00000543941 PDE4BQ07343 736 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 MUM1L1Q5H9M0 696 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 NACAP1Q9BZK3 213 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 PDLIM7Q9NR12 457 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 HELLSQ9NRZ9 838 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 SYNPO2Q9UMS6 1093 aa13.51□□□□□ -0.25
C1RL-209ENST00000543941 ORC4O43929 436 aa13.5□□□□□ -0.25
C1RL-209ENST00000543941 ZBED4O75132 1171 aa13.5□□□□□ -0.25
C1RL-209ENST00000543941 C9orf50Q5SZB4 431 aa13.5□□□□□ -0.25
C1RL-209ENST00000543941 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
C1RL-209ENST00000543941 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms