RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MMP19Q99542 508 aa12.13□□□□□ -0.47
NPIPB4-217ENST00000543449 CNNM2Q9H8M5 875 aa12.13□□□□□ -0.47
NPIPB4-217ENST00000543449 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
NPIPB4-217ENST00000543449 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 IKQ13123 557 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 CHST13Q8NET6 341 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 KRT23Q9C075 422 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 FBXO28Q9NVF7 368 aa12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 ZNF214Q9UL59 606 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-217ENST00000543449 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 TMEM232C9JQI7 657 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 PDE4AP27815 886 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 REPS2Q8NFH8 660 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 OGDHLQ9ULD0 1010 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
NPIPB4-217ENST00000543449 PLXNB2O15031 1838 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 MCCP23508 829 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 HAND2P61296 217 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 TRDNQ13061 729 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 CCL14Q16627 93 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 DPF3Q92784 378 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 DDX11Q96FC9 970 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
NPIPB4-217ENST00000543449 RLFQ13129 1914 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 CHMLP26374 656 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 TRIM32Q13049 653 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 CPXCR1Q8N123 301 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 DDX20Q9UHI6 824 aaKnown RBP12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
NPIPB4-217ENST00000543449 COBLO75128 1261 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 IGHA2P01877 340 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 CNGA1P29973 690 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 BTNL9Q6UXG8 535 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 KIAA1211Q6ZU35 1233 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 TBC1D10CQ8IV04 446 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 C11orf49Q9H6J7 331 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 RAVER2Q9HCJ3 691 aaKnown RBP12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 PFASO15067 1338 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 SYNGAP1Q96PV0 1343 aa12.08□□□□□ -0.48
NPIPB4-217ENST00000543449 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 SEPT4O43236 478 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 NMT2O60551 498 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 NEFLP07196 543 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 CYBAP13498 195 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 CYP2C19P33261 490 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 ZNF792Q3KQV3 632 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 CASC1Q6TDU7 716 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 ANKS1AQ92625 1134 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 MAF1Q9H063 256 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 FLRT1Q9NZU1 646 aa12.07□□□□□ -0.48
NPIPB4-217ENST00000543449 PDE4DIPQ5VU43 2346 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 ERICH2A1L162 156 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 SGSM2O43147 1006 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 EVI5O60447 810 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 KDM4AO75164 1064 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 PDHBP11177 359 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 SART3Q15020 963 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 LHX8Q68G74 356 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 MAMDC4Q6UXC1 1216 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 PRR12Q9ULL5 1215 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 NEDD4P46934 1319 aa12.06□□□□□ -0.48
NPIPB4-217ENST00000543449 DNAJC25-GNG10A0A024R161 153 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms