RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PLS1Q14651 629 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 SHCBP1Q8NEM2 672 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MOV10L1Q9BXT6 1211 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 MROH8Q9H579 483 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 BRCA2P51587 3418 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
TNFRSF1A-214ENST00000543048 A0A0G2JMZ2 1700 aa11.52□□□□□ -0.56
TNFRSF1A-214ENST00000543048 VWA5AO00534 786 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLC25A27O95847 323 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TFRCP02786 760 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ERCC3P19447 782 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TMEM132BQ14DG7 1078 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLFN13Q68D06 897 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NUP88Q99567 741 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TACC3Q9Y6A5 838 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZMYM6O95789 1325 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RPTORQ8N122 1335 aa11.52□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZNF213O14771 459 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 PCP11498 1178 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZKSCAN1P17029 563 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 STAT3P40763 770 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 HAND2P61296 217 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TRIM32Q13049 653 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 GRB14Q14449 540 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 AKNAD1Q5T1N1 836 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MFSD6Q6ZSS7 791 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DPP9Q86TI2 863 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NCAPG2Q86XI2 1143 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TRIB2Q92519 343 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 APBA2Q99767 749 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TCP11L1Q9NUJ3 509 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FEM1BQ9UK73 627 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MKI67P46013 3256 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZBED4O75132 1171 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 HOXC6P09630 235 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 BMP3P12645 472 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NOVP48745 357 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CCL14Q16627 93 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MFSD14CQ5VZR4 134 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RIOX2Q8IUF8 465 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ABRAQ8N0Z2 381 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 LRRC47Q8N1G4 583 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CHURC1Q8WUH1 139 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SHISA4Q96DD7 197 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DSCC1Q9BVC3 393 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLC5A4Q9NY91 659 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CTNNA3Q9UI47 895 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 STX8Q9UNK0 236 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 LAMA4Q16363 1823 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CEP290O15078 2479 aa11.5□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NMT2O60551 498 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FDX1P10109 184 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FCER1AP12319 257 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MCCP23508 829 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ADORA2AP29274 412 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 COPB2P35606 906 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 REPS2Q8NFH8 660 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NPLOC4Q8TAT6 608 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 STAG1Q8WVM7 1258 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TTC14Q96N46 770 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZNF236Q9UL36 1845 aa11.49□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ATP2A1O14983 1001 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 PLA2G6O60733 806 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 COBLO75128 1261 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TOP1P11387 765 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CHMLP26374 656 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLC1A4P43007 532 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 NT5C2P49902 561 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FAM160B2Q86V87 743 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MMP19Q99542 508 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms