RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 REPS2Q8NFH8 660 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 NUP133Q8WUM0 1156 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 GTF3C6Q969F1 213 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 FEZ1Q99689 392 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 LLPHQ9BRT6 129 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 MYL10Q9BUA6 226 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 SPZ1Q9BXG8 430 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 UBA5Q9GZZ9 404 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 ASCC2Q9H1I8 757 aaPredicted RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 RPAP3Q9H6T3 665 aaPredicted RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 JMJD4Q9H9V9 463 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 PPP1R9AQ9ULJ8 1098 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
ABCF1-207ENST00000542772 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
ABCF1-207ENST00000542772 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 VWA5AO00534 786 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 AOC2O75106 756 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 PLEKHA8P1O95397 391 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 ALDH1A1P00352 501 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 FDPSP14324 419 aaKnown RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RXRAP19793 462 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 OAZ1P54368 228 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 HTRA3P83110 453 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 PKN1Q16512 942 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RTN1Q16799 776 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 SYDE2Q5VT97 1194 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 OTUD7BQ6GQQ9 843 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RASGRP2Q7LDG7 609 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 MICU3Q86XE3 530 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 SLF1Q9BQI6 1058 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RNF26Q9BY78 433 aaPredicted RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 MAF1Q9H063 256 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RANBP17Q9H2T7 1088 aaKnown RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 SLC38A10Q9HBR0 1119 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 GPCPD1Q9NPB8 672 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 FBXO28Q9NVF7 368 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.82□□□□□ -1.32
ABCF1-207ENST00000542772 RBPJLQ9UBG7 517 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
ABCF1-207ENST00000542772 ZNF536O15090 1300 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 FRMPD2Q68DX3 1309 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 PNMA6FA0A0J9YX94 578 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 SPDYE16A6NNV3 312 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 ZBTB5O15062 677 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CA12O43570 354 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 TLR2O60603 784 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CNMDO75829 334 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 FLOT1O75955 427 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 FMNL1O95466 1100 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 SLC16A2P36021 539 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 GCLCP48506 637 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 HERVK_113P62684 666 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 STK3Q13188 491 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 Q3C1V9 767 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CPLX2Q6PUV4 134 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 RAB11FIP4Q86YS3 637 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 FAM177A1Q8N128 213 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CMTR1Q8N1G2 835 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 MB21D1Q8N884 522 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 NECAB1Q8N987 351 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 NSUN7Q8NE18 718 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 ATG4CQ96DT6 458 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CPVLQ9H3G5 476 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 NCOA5Q9HCD5 579 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 VAT1LQ9HCJ6 419 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 RBM27Q9P2N5 1060 aaKnown RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 MORF4L1Q9UBU8 362 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 PNMA2Q9UL42 364 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 ZNF214Q9UL59 606 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 MTMR7Q9Y216 660 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 RABGAP1Q9Y3P9 1069 aa6.81□□□□□ -1.32
ABCF1-207ENST00000542772 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
ABCF1-207ENST00000542772 CNTNAP5Q8WYK1 1306 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 STK36Q9NRP7 1315 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 SMCHD1A6NHR9 2005 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CPLX1O14810 134 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 RAD21O60216 631 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 ZBED4O75132 1171 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CDKL5O76039 1030 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 DEXIO95424 95 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 ICAM1P05362 532 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 CYP2C8P10632 490 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 BCRP11274 1271 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 HMGN5P82970 282 aaKnown RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 GHRHRQ02643 423 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 SSRP1Q08945 709 aaKnown RBP6.8□□□□□ -1.32
ABCF1-207ENST00000542772 TRAF1Q13077 416 aa6.8□□□□□ -1.32
ABCF1-207ENST00000542772 TMEM132BQ14DG7 1078 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms