RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CASP1P29466 404 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 DTHD1Q6ZMT9 781 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 APTXQ7Z2E3 356 aaKnown RBP20.31■□□□□ 0.84
GNE-204ENST00000539208 TMEM139Q8IV31 216 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 PROM2Q8N271 834 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 RASGRP4Q8TDF6 673 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 MTRQ99707 1265 aa20.31■□□□□ 0.84
GNE-204ENST00000539208 GTF2IP78347 998 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 TXNRD1Q16881 649 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 CEP95Q96GE4 821 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 CTAGE1Q96RT6 745 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 RMND1Q9NWS8 449 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
GNE-204ENST00000539208 ARHGAP6O43182 974 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 HSP90AA4PQ58FG1 418 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 KRT25Q7Z3Z0 450 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 RRP36Q96EU6 259 aaKnown RBP20.29■□□□□ 0.84
GNE-204ENST00000539208 ANKRD31Q8N7Z5 1873 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 NRXN2Q9P2S2 1712 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 GNA11P29992 359 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 GABPAQ06546 454 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 SEMA3FQ13275 785 aa20.29■□□□□ 0.84
GNE-204ENST00000539208 STX10O60499 249 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 INF2Q27J81 1249 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 NLGN1Q8N2Q7 840 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 CCSER1Q9C0I3 900 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 DISC1Q9NRI5 854 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 hCG_1984214I3L0E3 225 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 MYL1P05976 194 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 SRGNP10124 158 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 NPR1P16066 1061 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 NAPAP54920 295 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 KLHL10Q6JEL2 608 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 ZNF713Q8N859 430 aaPredicted RBP20.28■□□□□ 0.84
GNE-204ENST00000539208 TC2NQ8N9U0 490 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 RWDD2AQ9UIY3 292 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 MTMR7Q9Y216 660 aa20.28■□□□□ 0.84
GNE-204ENST00000539208 ESYT2A0FGR8 921 aa20.27■□□□□ 0.84
GNE-204ENST00000539208 ZNF658Q5TYW1 1059 aaPredicted RBP20.27■□□□□ 0.84
GNE-204ENST00000539208 USP17L2Q6R6M4 530 aa20.27■□□□□ 0.84
GNE-204ENST00000539208 STAMQ92783 540 aa20.27■□□□□ 0.84
GNE-204ENST00000539208 ZC3H12CQ9C0D7 883 aaKnown RBP20.27■□□□□ 0.84
GNE-204ENST00000539208 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.84
GNE-204ENST00000539208 TMEM60Q9H2L4 133 aa20.27■□□□□ 0.84
GNE-204ENST00000539208 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
GNE-204ENST00000539208 ZSCAN12O43309 604 aa20.27■□□□□ 0.83
GNE-204ENST00000539208 RPN1P04843 607 aaKnown RBP20.27■□□□□ 0.83
GNE-204ENST00000539208 STAT6P42226 847 aa20.27■□□□□ 0.83
GNE-204ENST00000539208 NCBP1Q09161 790 aaKnown RBP20.27■□□□□ 0.83
GNE-204ENST00000539208 ORC2Q13416 577 aaPredicted RBP20.27■□□□□ 0.83
GNE-204ENST00000539208 BAG1Q99933 345 aaPredicted RBP20.27■□□□□ 0.83
GNE-204ENST00000539208 MTMR4Q9NYA4 1195 aa20.27■□□□□ 0.83
GNE-204ENST00000539208 SEC63Q9UGP8 760 aaKnown RBP20.27■□□□□ 0.83
GNE-204ENST00000539208 MYO3BQ8WXR4 1341 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 IGKV6D-41A0A0C4DH26 115 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 SMCO2A6NFE2 343 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 PBX1P40424 430 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 STX17P56962 302 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 NONOQ15233 471 aaKnown RBP eCLIP20.26■□□□□ 0.83
GNE-204ENST00000539208 RRAGBQ5VZM2 374 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 SMYD4Q8IYR2 804 aaPredicted RBP20.26■□□□□ 0.83
GNE-204ENST00000539208 AK8Q96MA6 479 aa20.26■□□□□ 0.83
GNE-204ENST00000539208 LRRC10BA6NIK2 292 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 ALDH1B1P30837 517 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 KARSQ15046 597 aaKnown RBP20.25■□□□□ 0.83
GNE-204ENST00000539208 REXO1L1PQ8IX06 675 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 L2HGDHQ9H9P8 463 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 UBA7P41226 1012 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 ETF1P62495 437 aaKnown RBP20.25■□□□□ 0.83
GNE-204ENST00000539208 PTPN21Q16825 1174 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 FILIP1LQ4L180 1135 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 NAALADL2Q58DX5 795 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 CUEDC2Q9H467 287 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 SWAP70Q9UH65 585 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 CTNND2Q9UQB3 1225 aa20.25■□□□□ 0.83
GNE-204ENST00000539208 USP17L5A8MUK1 530 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 SNHG28P0DPA3 235 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 PDHBP11177 359 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 CDC25AP30304 524 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 GOLGA8FQ08AF8 430 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 GOLGA8DPQ0D2H9 430 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 KCNB1Q14721 858 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 ASPRV1Q53RT3 343 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 RASGRP2Q7LDG7 609 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 PANX2Q96RD6 677 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 CPVLQ9H3G5 476 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 MAGEF1Q9HAY2 307 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 LIMA1Q9UHB6 759 aaKnown RBP20.24■□□□□ 0.83
GNE-204ENST00000539208 SPAG1Q07617 926 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 PAK1Q13153 545 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 HHIPL2Q6UWX4 724 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 PIGSQ96S52 555 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms