RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CTNNA3Q9UI47 895 aa20.32■□□□□ 0.84
SFSWAP-205ENST00000537164 PLXNA1Q9UIW2 1896 aa20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 OLFML2BQ68BL8 750 aa20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 RUFY2Q8WXA3 655 aa20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 TOMM22Q9NS69 142 aa20.31■□□□□ 0.84
SFSWAP-205ENST00000537164 COBLO75128 1261 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 FCER1AP12319 257 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 SLC1A4P43007 532 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 STAT2P52630 851 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 OAZ1P54368 228 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 RRP12Q5JTH9 1297 aaKnown RBP20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 RCSD1Q6JBY9 416 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 DPP9Q86TI2 863 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 FAM160B2Q86V87 743 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 CHURC1Q8WUH1 139 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 ESR2Q92731 530 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 FRMPD3Q5JV73 1810 aa20.3■□□□□ 0.84
SFSWAP-205ENST00000537164 NEDD4P46934 1319 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 TMEM232C9JQI7 657 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 ZBED4O75132 1171 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 MCCP23508 829 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 IMMTQ16891 758 aaKnown RBP20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 ANKLE1Q8NAG6 615 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 KIFC2Q96AC6 838 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 SLC5A4Q9NY91 659 aa20.29■□□□□ 0.84
SFSWAP-205ENST00000537164 SGSM2O43147 1006 aa20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 PRPF38BQ5VTL8 546 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 SNRNP48Q6IEG0 339 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 DCAF4Q8WV16 495 aa20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 TMEM47Q9BQJ4 181 aa20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 OGDHLQ9ULD0 1010 aa20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 DNAH12Q6ZR08 3092 aa20.28■□□□□ 0.84
SFSWAP-205ENST00000537164 CEP290O15078 2479 aa20.27■□□□□ 0.84
SFSWAP-205ENST00000537164 TFRCP02786 760 aaKnown RBP20.27■□□□□ 0.84
SFSWAP-205ENST00000537164 DGKHQ86XP1 1220 aa20.27■□□□□ 0.84
SFSWAP-205ENST00000537164 RIPK3Q9Y572 518 aa20.27■□□□□ 0.84
SFSWAP-205ENST00000537164 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 CCND3P30281 292 aaPredicted RBP20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 KCTD2Q14681 263 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 CCDC178Q5BJE1 867 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 LHX8Q68G74 356 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 BTNL9Q6UXG8 535 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 ANKS1AQ92625 1134 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 MAML3Q96JK9 1138 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 MMP19Q99542 508 aa20.26■□□□□ 0.83
SFSWAP-205ENST00000537164 KDM4AO75164 1064 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 CYBAP13498 195 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 CYP2C19P33261 490 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 MNX1P50219 401 aaPredicted RBP20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 ZNF792Q3KQV3 632 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 RASGRP2Q7LDG7 609 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 KRT23Q9C075 422 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 CNNM2Q9H8M5 875 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 ZNF536O15090 1300 aa20.25■□□□□ 0.83
SFSWAP-205ENST00000537164 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 PDHBP11177 359 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 PTH1RQ03431 593 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 CPXCR1Q8N123 301 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 FBXO40Q9UH90 709 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 PRR12Q9ULL5 1215 aa20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 CTDP1Q9Y5B0 961 aaPredicted RBP20.24■□□□□ 0.83
SFSWAP-205ENST00000537164 B4E1Z4 1266 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 MSCO60682 206 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 BMP2KLQ5H9B9 411 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 TRPV1Q8NER1 839 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 MAP4K1Q92918 833 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 NRBP1Q9UHY1 535 aa20.23■□□□□ 0.83
SFSWAP-205ENST00000537164 PGK2P07205 417 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 CYP21A2P08686 494 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 IKQ13123 557 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 TKFCQ3LXA3 575 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 ZSCAN10Q96SZ4 725 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 ZKSCAN3Q9BRR0 538 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 HTATIP2Q9BUP3 242 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 SMCHD1A6NHR9 2005 aa20.22■□□□□ 0.83
SFSWAP-205ENST00000537164 ALPK3Q96L96 1907 aa20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 ZNF543Q08ER8 600 aa20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 ENAHQ8N8S7 591 aaPredicted RBP20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 PAWRQ96IZ0 340 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 TINF2Q9BSI4 451 aa20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 DDX20Q9UHI6 824 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-205ENST00000537164 TTBK2Q6IQ55 1244 aa20.2■□□□□ 0.82
SFSWAP-205ENST00000537164 MAMDC4Q6UXC1 1216 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms