RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MB21D1Q8N884 522 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 NEK1Q96PY6 1258 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 SLC38A10Q9HBR0 1119 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 PRR12Q9ULL5 1215 aa20.97■□□□□ 0.95
DDX55-204ENST00000536079 SH2B2O14492 632 aaPredicted RBP20.96■□□□□ 0.95
DDX55-204ENST00000536079 PLA2G6O60733 806 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 GNRH1P01148 92 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 ERCC3P19447 782 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 WTAPQ15007 396 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 C8orf34Q49A92 452 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 BTNL9Q6UXG8 535 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 ABHD8Q96I13 439 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 UBA5Q9GZZ9 404 aa20.96■□□□□ 0.95
DDX55-204ENST00000536079 RAVER2Q9HCJ3 691 aaKnown RBP20.96■□□□□ 0.95
DDX55-204ENST00000536079 COL11A1P12107 1806 aaPredicted RBP20.95■□□□□ 0.94
DDX55-204ENST00000536079 MAPK4P31152 587 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 MCM5P33992 734 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 IKQ13123 557 aaPredicted RBP20.95■□□□□ 0.94
DDX55-204ENST00000536079 ARHGEF6Q15052 776 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 MORN1Q5T089 497 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 PLEKHH3Q7Z736 793 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 FAM160B2Q86V87 743 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 CPXCR1Q8N123 301 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 STAG2Q8N3U4 1231 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 CHURC1Q8WUH1 139 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 ZNF536O15090 1300 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 DOCK3Q8IZD9 2030 aa20.95■□□□□ 0.94
DDX55-204ENST00000536079 PLXNB2O15031 1838 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 ZKSCAN1P17029 563 aaPredicted RBP20.94■□□□□ 0.94
DDX55-204ENST00000536079 HOXD10P28358 340 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 STAT3P40763 770 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 CCNA1P78396 465 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 SLC35G1Q2M3R5 365 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 SYDE2Q5VT97 1194 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 WDR78Q5VTH9 848 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 RIOX2Q8IUF8 465 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 USP6NLQ92738 828 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 COA7Q96BR5 231 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 JAKMIP1Q96N16 626 aaKnown RBP20.94■□□□□ 0.94
DDX55-204ENST00000536079 MYL10Q9BUA6 226 aa20.94■□□□□ 0.94
DDX55-204ENST00000536079 ZBED4O75132 1171 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 PTPREP23469 700 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 SLC4A3P48751 1232 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 SNRNP48Q6IEG0 339 aaKnown RBP20.93■□□□□ 0.94
DDX55-204ENST00000536079 CCDC174Q6PII3 467 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 DHX32Q7L7V1 743 aaKnown RBP20.93■□□□□ 0.94
DDX55-204ENST00000536079 NCAPG2Q86XI2 1143 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 SH3TC2Q8TF17 1288 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 AGBL1Q96MI9 1066 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 MAD2L2Q9UI95 211 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 CENPFP49454 3210 aa20.93■□□□□ 0.94
DDX55-204ENST00000536079 ERICH2A1L162 156 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 ATP2A1O14983 1001 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
DDX55-204ENST00000536079 ELNP15502 786 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 TROAPQ12815 778 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 RAB11FIP4Q86YS3 637 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 CCAR1Q8IX12 1150 aaKnown RBP20.92■□□□□ 0.94
DDX55-204ENST00000536079 SHCBP1Q8NEM2 672 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 RAET1EQ8TD07 263 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 TMEM87BQ96K49 555 aa20.92■□□□□ 0.94
DDX55-204ENST00000536079 RANBP17Q9H2T7 1088 aaKnown RBP20.92■□□□□ 0.94
DDX55-204ENST00000536079 CYP2B6P20813 491 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 PRMT2P55345 433 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 KRT32Q14532 448 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 GRM4Q14833 912 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
DDX55-204ENST00000536079 MTA3Q9BTC8 594 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 TEX13BQ9BXU2 312 aa20.91■□□□□ 0.94
DDX55-204ENST00000536079 PALM3A6NDB9 673 aaPredicted RBP20.9■□□□□ 0.94
DDX55-204ENST00000536079 COBLO75128 1261 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 PARP1P09874 1014 aaKnown RBP20.9■□□□□ 0.94
DDX55-204ENST00000536079 RXRAP19793 462 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 IRF5Q13568 498 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 GRB14Q14449 540 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 CCL14Q16627 93 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 GPATCH4Q5T3I0 446 aaKnown RBP20.9■□□□□ 0.94
DDX55-204ENST00000536079 NBPF11Q86T75 865 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
DDX55-204ENST00000536079 SLC15A5A6NIM6 579 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 ADCY3O60266 1144 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 SLC25A27O95847 323 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 LIFRP42702 1097 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 TRIM32Q13049 653 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 ADGRF4Q8IZF3 695 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 NPLOC4Q8TAT6 608 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 NUP133Q8WUM0 1156 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 NUDT12Q9BQG2 462 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 MROH8Q9H579 483 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 BRPF3Q9ULD4 1205 aa20.89■□□□□ 0.93
DDX55-204ENST00000536079 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.93
DDX55-204ENST00000536079 WDR19Q8NEZ3 1342 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 MYCP01106 439 aaPredicted RBP20.88■□□□□ 0.93
DDX55-204ENST00000536079 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
DDX55-204ENST00000536079 ADORA2AP29274 412 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 GRK4P32298 578 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 OAZ1P54368 228 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 MAP2K5Q13163 448 aa20.88■□□□□ 0.93
DDX55-204ENST00000536079 NFXL1Q6ZNB6 911 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms