RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	FGR	P09769	529 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	SLC16A2	P36021	539 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	STAT3	P40763	770 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	TMEM63B	Q5T3F8	832 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	RIOX2	Q8IUF8	465 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	SOCS4	Q8WXH5	440 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	AGBL1	Q96MI9	1066 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	SLF1	Q9BQI6	1058 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	NACAP1	Q9BZK3	213 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	CWC22	Q9HCG8	908 aa	Known RBP	11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	GOPC	Q9HD26	462 aa		11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.45	□□□□□ -0.58
SSBP3-215	ENST00000533946	TMEM232	C9JQI7	657 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	ADCY6	O43306	1168 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	TTLL1	O95922	423 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	CYBA	P13498	195 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	SYN1	P17600	705 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	CNGA1	P29973	690 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	NOV	P48745	357 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	CCNA1	P78396	465 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	PTH1R	Q03431	593 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	ZNF792	Q3KQV3	632 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	TTC22	Q5TAA0	569 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	SNRNP48	Q6IEG0	339 aa	Known RBP	11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	DPP9	Q86TI2	863 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	MAML3	Q96JK9	1138 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	STX8	Q9UNK0	236 aa		11.44	□□□□□ -0.58
SSBP3-215	ENST00000533946	ASTN1	O14525	1302 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	ORC4	O43929	436 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	COL6A1	P12109	1028 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	CNTN2	Q02246	1040 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	PDE4B	Q07343	736 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	LRRC26	Q2I0M4	334 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	MUM1L1	Q5H9M0	696 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	HABP4	Q5JVS0	413 aa	Known RBP	11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	GJC2	Q5T442	439 aa	Predicted RBP	11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	CHRDL2	Q6WN34	429 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	SHCBP1	Q8NEM2	672 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	MMP19	Q99542	508 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	TMEM47	Q9BQJ4	181 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	SH2D4A	Q9H788	454 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	SLC38A10	Q9HBR0	1119 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	SENP2	Q9HC62	589 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	TOMM22	Q9NS69	142 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	HOMER2	Q9NSB8	354 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	RBM27	Q9P2N5	1060 aa	Known RBP	11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	IVNS1ABP	Q9Y6Y0	642 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	LAMA4	Q16363	1823 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	COL6A3	P12111	3177 aa		11.43	□□□□□ -0.58
SSBP3-215	ENST00000533946	TSPY2	A6NKD2	308 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	SNAI1	O95863	264 aa	Predicted RBP	11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	BMP3	P12645	472 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	CCDC174	Q6PII3	467 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	C7orf61	Q8IZ16	206 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	GMCL1P1	Q8NEA9	526 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	PRO3102	Q9H379	93 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	MROH8	Q9H579	483 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	GPCPD1	Q9NPB8	672 aa		11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	ISY1	Q9ULR0	285 aa	Known RBP	11.42	□□□□□ -0.58
SSBP3-215	ENST00000533946	DNAJC25-GNG10	A0A024R161	153 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946		B4E1Z4	1266 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	GOLGA8H	P0CJ92	632 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	FCER1A	P12319	257 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	ATN1	P54259	1190 aa	Predicted RBP	11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	AAMP	Q13685	434 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	AKNAD1	Q5T1N1	836 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	CYB5R4	Q7L1T6	521 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	MB21D1	Q8N884	522 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	PRPF38A	Q8NAV1	312 aa	Known RBP	11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	DDX20	Q9UHI6	824 aa	Known RBP	11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	PRR12	Q9ULL5	1215 aa		11.41	□□□□□ -0.58
SSBP3-215	ENST00000533946	EYS	Q5T1H1	3165 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	MYADML2	A6NDP7	307 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	SOWAHB	A6NEL2	793 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	SOX1	O00570	391 aa	Predicted RBP	11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	STRN	O43815	780 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	SLC34A2	O95436	690 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	PGK1	P00558	417 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	MYCN	P04198	464 aa	Predicted RBP	11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	CHML	P26374	656 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	SLC35G1	Q2M3R5	365 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	MFSD14C	Q5VZR4	134 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	OLFML2B	Q68BL8	750 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	STOX1	Q6ZVD7	989 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	NECAB2	Q7Z6G3	386 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	STAG1	Q8WVM7	1258 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	FERMT2	Q96AC1	680 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	C11orf49	Q9H6J7	331 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	DIAPH3	Q9NSV4	1193 aa		11.4	□□□□□ -0.58
SSBP3-215	ENST00000533946	KDM4A	O75164	1064 aa		11.39	□□□□□ -0.59
SSBP3-215	ENST00000533946	SLC25A27	O95847	323 aa		11.39	□□□□□ -0.59
SSBP3-215	ENST00000533946	SLC1A4	P43007	532 aa		11.39	□□□□□ -0.59
SSBP3-215	ENST00000533946	FXR1	P51114	621 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
SSBP3-215	ENST00000533946	TBC1D5	Q92609	795 aa		11.39	□□□□□ -0.59
SSBP3-215	ENST00000533946	GMCL1	Q96IK5	515 aa		11.39	□□□□□ -0.59

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