RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 MSRAQ9UJ68 235 aa15□□□□□ -0.01
CAPN1-223ENST00000533079 ZNF532Q9HCE3 1301 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 BCAR3O75815 825 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 AKR1B1P15121 316 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 CSF2RAP15509 400 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 PBX2P40425 430 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 EVX2Q03828 476 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 ZKSCAN2Q63HK3 967 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 REPS2Q8NFH8 660 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.99□□□□□ -0.01
CAPN1-223ENST00000533079 UPF3AQ9H1J1 476 aaKnown RBP14.99□□□□□ -0.01
CAPN1-223ENST00000533079 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
CAPN1-223ENST00000533079 ARIH1Q9Y4X5 557 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-223ENST00000533079 DNAJC25-GNG10A0A024R161 153 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 ARVCFO00192 962 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 ASGR1P07306 291 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 C6orf222P0C671 652 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 C16orf86Q6ZW13 317 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 C16orf59Q7L2K0 433 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 AACSQ86V21 672 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 CLEC10AQ8IUN9 316 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 FAM126BQ8IXS8 530 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 PPM1EQ8WY54 764 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 HERVK_113Q902F9 699 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 IL23AQ9NPF7 189 aa14.98□□□□□ -0.01
CAPN1-223ENST00000533079 CXXC1Q9P0U4 656 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 ZHX1Q9UKY1 873 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-223ENST00000533079 APBB1O00213 710 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 ATP2A1O14983 1001 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 SNAI1O95863 264 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-223ENST00000533079 EEF2P13639 858 aaKnown RBP14.97□□□□□ -0.01
CAPN1-223ENST00000533079 GJA9P57773 515 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 ADGRE1Q14246 886 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 AAK1Q2M2I8 961 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 ZNF365Q70YC5 407 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 DDRGK1Q96HY6 314 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 SEZ6LQ9BYH1 1024 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 ABHD16BQ9H3Z7 469 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 SLC28A3Q9HAS3 691 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 FBXO28Q9NVF7 368 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
CAPN1-223ENST00000533079 MYADML2A6NDP7 307 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 SMCHD1A6NHR9 2005 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 GRXCR1A8MXD5 290 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 CYP2D6P10635 497 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 CDK8P49336 464 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 NKX3-2P78367 333 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 ACVR2BQ13705 512 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 C12orf60Q5U649 245 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 SNRNP48Q6IEG0 339 aaKnown RBP14.96□□□□□ -0.01
CAPN1-223ENST00000533079 SLF1Q9BQI6 1058 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 C1orf115Q9H7X2 142 aa14.96□□□□□ -0.01
CAPN1-223ENST00000533079 REV3LO60673 3130 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 CD4P01730 458 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 IGFBP4P22692 258 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 FAM83BQ5T0W9 1011 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
CAPN1-223ENST00000533079 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-223ENST00000533079 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 GBF1Q92538 1859 aa14.95□□□□□ -0.02
CAPN1-223ENST00000533079 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 CABYRO75952 493 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 FGBP02675 491 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-223ENST00000533079 CCDC144BQ3MJ40 725 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 VTI1AQ96AJ9 217 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■□□ 17.7
CAPN1-223ENST00000533079 NKX2-4Q9H2Z4 354 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 ARMT1Q9H993 441 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 RAPGEFL1Q9UHV5 662 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 BDP1A6H8Y1 2624 aa14.94□□□□□ -0.02
CAPN1-223ENST00000533079 LRRC37A2A6NM11 1700 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 GOLIM4O00461 696 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 MBD4O95243 580 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 ACRP10323 421 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 CCDC85BQ15834 202 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 GNASQ5JWF2 1037 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 PPP2R2DQ66LE6 453 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 ITPRIPQ8IWB1 547 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 PRPF38AQ8NAV1 312 aaKnown RBP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 SLC43A3Q8NBI5 491 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 DNAJC2Q99543 621 aaKnown RBP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 HIPK3Q9H422 1215 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 ARPP21Q9UBL0 812 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 EXOC6BQ9Y2D4 811 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 HCN4Q9Y3Q4 1203 aa14.93□□□□□ -0.02
CAPN1-223ENST00000533079 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
CAPN1-223ENST00000533079 TRANK1O15050 2925 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms