RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
CTSB-222ENST00000531551 GPAT2Q6NUI2 795 aa20.5■□□□□ 0.87
CTSB-222ENST00000531551 CATSPERGQ6ZRH7 1159 aa20.5■□□□□ 0.87
CTSB-222ENST00000531551 ZIC5Q96T25 663 aa20.5■□□□□ 0.87
CTSB-222ENST00000531551 BTBD19C9JJ37 291 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 AOC2O75106 756 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 CDKL5O76039 1030 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 IRX3P78415 501 aaPredicted RBP20.49■□□□□ 0.87
CTSB-222ENST00000531551 KIF23Q02241 960 aaPredicted RBP20.49■□□□□ 0.87
CTSB-222ENST00000531551 PABPC4Q13310 644 aaKnown RBP eCLIP20.49■□□□□ 0.874e-12■■■■■ 77.3
CTSB-222ENST00000531551 SYDE2Q5VT97 1194 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 FAM160B2Q86V87 743 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 ADGRF4Q8IZF3 695 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 SLF1Q9BQI6 1058 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 SLC26A6Q9BXS9 759 aa20.49■□□□□ 0.87
CTSB-222ENST00000531551 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
CTSB-222ENST00000531551 hCG_1642624A0A1W2PR95 340 aa20.48■□□□□ 0.87
CTSB-222ENST00000531551 SNAP25P60880 206 aa20.48■□□□□ 0.87
CTSB-222ENST00000531551 NTRK3Q16288 839 aa20.48■□□□□ 0.87
CTSB-222ENST00000531551 DDX11Q96FC9 970 aa20.48■□□□□ 0.87
CTSB-222ENST00000531551 PRR12Q9ULL5 1215 aa20.48■□□□□ 0.87
CTSB-222ENST00000531551 PDHXO00330 501 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 CYTH3O43739 400 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 JAK2O60674 1132 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 OSBPP22059 807 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 NOGQ13253 232 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 CUL4AQ13619 759 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 PRPF38AQ8NAV1 312 aaKnown RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 PTPN18Q99952 460 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 PTPDC1A2A3K4 754 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 HSPA6P17066 643 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 IFNAR1P17181 557 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 HOXA7P31268 230 aaPredicted RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 SREBF2Q12772 1141 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 COG2Q14746 738 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 SLC35G1Q2M3R5 365 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
CTSB-222ENST00000531551 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 CTDP1Q9Y5B0 961 aaPredicted RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
CTSB-222ENST00000531551 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 TRIM22Q8IYM9 498 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 CNTNAP5Q8WYK1 1306 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 PIGSQ96S52 555 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 SPZ1Q9BXG8 430 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
CTSB-222ENST00000531551 ASCC2Q9H1I8 757 aaPredicted RBP20.46■□□□□ 0.87
CTSB-222ENST00000531551 JMJD4Q9H9V9 463 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
CTSB-222ENST00000531551 TESPA1A2RU30 521 aaPredicted RBP20.45■□□□□ 0.86
CTSB-222ENST00000531551 PLA2G6O60733 806 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 VEGFBP49765 207 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 INHBEP58166 350 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 FUT2Q10981 343 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 ATG4CQ96DT6 458 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 RRP36Q96EU6 259 aaKnown RBP20.45■□□□□ 0.86
CTSB-222ENST00000531551 P2RX7Q99572 595 aaKnown RBP20.45■□□□□ 0.86
CTSB-222ENST00000531551 LLPHQ9BRT6 129 aaKnown RBP20.45■□□□□ 0.86
CTSB-222ENST00000531551 RIOX1Q9H6W3 641 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 HOXC10Q9NYD6 342 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.86
CTSB-222ENST00000531551 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 IGF2BP3O00425 579 aaKnown RBP eCLIP20.45■□□□□ 0.864e-7■■□□□ 11.8
CTSB-222ENST00000531551 CYP2C8P10632 490 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 SMARCA1P28370 1054 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 DSG3P32926 999 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 CCDC174Q6PII3 467 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 PNMA3Q9UL41 463 aa20.45■□□□□ 0.86
CTSB-222ENST00000531551 FMNL1O95466 1100 aaPredicted RBP20.44■□□□□ 0.86
CTSB-222ENST00000531551 CDC37Q16543 378 aaPredicted RBP20.44■□□□□ 0.86
CTSB-222ENST00000531551 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
CTSB-222ENST00000531551 PTPRFP10586 1907 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 ZBED4O75132 1171 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 OTUD7BQ6GQQ9 843 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 IFNL1Q8IU54 200 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 FAM184AQ8NB25 1140 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 SMCR8Q8TEV9 937 aaPredicted RBP20.43■□□□□ 0.86
CTSB-222ENST00000531551 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
CTSB-222ENST00000531551 SPDYE16A6NNV3 312 aaPredicted RBP20.43■□□□□ 0.86
CTSB-222ENST00000531551 PRPF3O43395 683 aaKnown RBP20.43■□□□□ 0.86
CTSB-222ENST00000531551 HERVK_113P62684 666 aa20.43■□□□□ 0.86
CTSB-222ENST00000531551 LOC285556D6RIA3 1793 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 VWA5AO00534 786 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 ZBTB5O15062 677 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 GJB2P29033 226 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 HMGN5P82970 282 aaKnown RBP20.42■□□□□ 0.86
CTSB-222ENST00000531551 QRICH1Q2TAL8 776 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 INTS4Q96HW7 963 aaKnown RBP20.42■□□□□ 0.86
CTSB-222ENST00000531551 SLC45A1Q9Y2W3 748 aa20.42■□□□□ 0.86
CTSB-222ENST00000531551 DEXIO95424 95 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 TM4SF4P48230 202 aa20.41■□□□□ 0.86
CTSB-222ENST00000531551 FOSBP53539 338 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms