RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 DCP1AQ9NPI6 582 aaPredicted RBP19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 MSRAQ9UJ68 235 aa19.72■□□□□ 0.75
CHMP4A-203ENST00000527154 A0A0U1RQG5 324 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 MPHOSPH10O00566 681 aaKnown RBP19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 ERC2O15083 957 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 CTAGE5O15320 804 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 ACRP10323 421 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 GJA9P57773 515 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 IRX5P78411 483 aaPredicted RBP19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 ICA1Q05084 483 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 VWCEQ96DN2 955 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 NKX2-4Q9H2Z4 354 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 FBXO28Q9NVF7 368 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 PPP1R9AQ9ULJ8 1098 aa19.71■□□□□ 0.75
CHMP4A-203ENST00000527154 ASGR1P07306 291 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 AKR1B1P15121 316 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 CLEC10AQ8IUN9 316 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 PCSK9Q8NBP7 692 aaKnown RBP19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 LRFN3Q9BTN0 628 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 SLC28A3Q9HAS3 691 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 MCM9Q9NXL9 1143 aa19.7■□□□□ 0.74
CHMP4A-203ENST00000527154 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 IGFBP4P22692 258 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 CCDC17Q96LX7 622 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 FGD4Q96M96 766 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 CCDC8Q9H0W5 538 aaPredicted RBP19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
CHMP4A-203ENST00000527154 TCRBV5S4A2TA0A5A2 114 aa19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 TFF2Q03403 129 aa19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 AAK1Q2M2I8 961 aa19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 CRNKL1Q9BZJ0 848 aaKnown RBP19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 KATNBL1Q9H079 304 aa19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 TSPYL2Q9H2G4 693 aaPredicted RBP19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 GBF1Q92538 1859 aa19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 TCF20Q9UGU0 1960 aaKnown RBP19.68■□□□□ 0.74
CHMP4A-203ENST00000527154 ATP2A1O14983 1001 aa19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 SURF6O75683 361 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 CYP2D6P10635 497 aa19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 MTIF3Q9H2K0 278 aaKnown RBP19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 C11orf16Q9NQ32 467 aa19.67■□□□□ 0.74
CHMP4A-203ENST00000527154 FGBP02675 491 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 PDE6AP16499 860 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 CYP2C18P33260 490 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 SDR42E1Q8WUS8 393 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 DYNLL2Q96FJ2 89 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 TEX13BQ9BXU2 312 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 ABHD16BQ9H3Z7 469 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 EPHX3Q9H6B9 360 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 PCDHA11Q9Y5I1 949 aa19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 PRRC2BQ5JSZ5 2229 aaKnown RBP19.66■□□□□ 0.74
CHMP4A-203ENST00000527154 IPO8O15397 1037 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 TLR3O15455 904 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 C6orf222P0C671 652 aaPredicted RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 EEF2P13639 858 aaKnown RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 KCNQ1P51787 676 aa19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 ZHX1Q9UKY1 873 aaPredicted RBP19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 HCN4Q9Y3Q4 1203 aa19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 RIPK3Q9Y572 518 aa19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 UMODL1Q5DID0 1318 aa19.65■□□□□ 0.74
CHMP4A-203ENST00000527154 GPR37L1O60883 481 aa19.64■□□□□ 0.73
CHMP4A-203ENST00000527154 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
CHMP4A-203ENST00000527154 LCORLQ8N3X6 602 aa19.64■□□□□ 0.73
CHMP4A-203ENST00000527154 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
CHMP4A-203ENST00000527154 MTCH2Q9Y6C9 303 aa19.64■□□□□ 0.73
CHMP4A-203ENST00000527154 MUC6Q6W4X9 2439 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 GREB1LQ9C091 1923 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 ASTN1O14525 1302 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 TLL1O43897 1013 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 BCAR3O75815 825 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 CCDC144BQ3MJ40 725 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 GNASQ5JWF2 1037 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 SLC9C2Q5TAH2 1124 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 C16orf86Q6ZW13 317 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 NOC4LQ9BVI4 516 aaKnown RBP19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 SEZ6LQ9BYH1 1024 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 WNT8AQ9H1J5 351 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 HIPK3Q9H422 1215 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 SPC25Q9HBM1 224 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 COG5Q9UP83 839 aa19.63■□□□□ 0.73
CHMP4A-203ENST00000527154 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 ZNF532Q9HCE3 1301 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 CDK8P49336 464 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 TMEM31Q5JXX7 168 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 C12orf60Q5U649 245 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 OTOP2Q7RTS6 562 aa19.62■□□□□ 0.73
CHMP4A-203ENST00000527154 CABYRO75952 493 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 RABGGTBP53611 331 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
CHMP4A-203ENST00000527154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms