RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 GABPAQ06546 454 aa21.3■■□□□ 1
PVT1-220ENST00000524165 MAMDC4Q6UXC1 1216 aa21.3■■□□□ 1
PVT1-220ENST00000524165 RPUSD2Q8IZ73 545 aaKnown RBP21.3■■□□□ 1
PVT1-220ENST00000524165 MEIS3Q99687 375 aa21.3■■□□□ 1
PVT1-220ENST00000524165 KCNH6Q9H252 994 aa21.3■■□□□ 1
PVT1-220ENST00000524165 MCM3APO60318 1980 aa21.3■■□□□ 1
PVT1-220ENST00000524165 NAV1Q8NEY1 1877 aa21.29■■□□□ 1
PVT1-220ENST00000524165 MPHOSPH10O00566 681 aaKnown RBP21.29■■□□□ 1
PVT1-220ENST00000524165 TMEM67Q5HYA8 995 aa21.29■■□□□ 1
PVT1-220ENST00000524165 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
PVT1-220ENST00000524165 ZNF512BQ96KM6 892 aaPredicted RBP21.29■■□□□ 1
PVT1-220ENST00000524165 MRS2Q9HD23 443 aa21.29■■□□□ 1
PVT1-220ENST00000524165 CD320Q9NPF0 282 aa21.29■■□□□ 1
PVT1-220ENST00000524165 ZHX1Q9UKY1 873 aaPredicted RBP21.29■■□□□ 1
PVT1-220ENST00000524165 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
PVT1-220ENST00000524165 STAT3P40763 770 aa21.28■■□□□ 1
PVT1-220ENST00000524165 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
PVT1-220ENST00000524165 GNASQ5JWF2 1037 aa21.28■■□□□ 1
PVT1-220ENST00000524165 MIGA1Q8NAN2 632 aa21.28■■□□□ 1
PVT1-220ENST00000524165 SLC43A3Q8NBI5 491 aa21.28■■□□□ 1
PVT1-220ENST00000524165 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
PVT1-220ENST00000524165 TMX2Q9Y320 296 aa21.28■■□□□ 1
PVT1-220ENST00000524165 UMODL1Q5DID0 1318 aa21.28■■□□□ 1
PVT1-220ENST00000524165 WDFY4Q6ZS81 3184 aa21.28■■□□□ 1
PVT1-220ENST00000524165 CA3P07451 260 aa21.27■■□□□ 1
PVT1-220ENST00000524165 TMEM179Q6ZVK1 233 aa21.27■■□□□ 1
PVT1-220ENST00000524165 SPICE1Q8N0Z3 855 aa21.27■■□□□ 1
PVT1-220ENST00000524165 SH2D4AQ9H788 454 aa21.27■■□□□ 1
PVT1-220ENST00000524165 VCPKMTQ9H867 229 aa21.27■■□□□ 1
PVT1-220ENST00000524165 EPOPA6NHQ4 379 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 ZBBXA8MT70 800 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 ZAP70P43403 619 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 CCL23P55773 120 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 NKX3-2P78367 333 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
PVT1-220ENST00000524165 KRT40Q6A162 431 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 SAMD1Q6SPF0 538 aaPredicted RBP21.26■□□□□ 0.99
PVT1-220ENST00000524165 ZNF467Q7Z7K2 595 aaPredicted RBP21.26■□□□□ 0.99
PVT1-220ENST00000524165 NOC4LQ9BVI4 516 aaKnown RBP21.26■□□□□ 0.99
PVT1-220ENST00000524165 SEZ6LQ9BYH1 1024 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 ARHGEF10LQ9HCE6 1279 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 GPR108Q9NPR9 543 aa21.26■□□□□ 0.99
PVT1-220ENST00000524165 ZNF214Q9UL59 606 aaPredicted RBP21.26■□□□□ 0.99
PVT1-220ENST00000524165 VWA5AO00534 786 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 ADCY6O43306 1168 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
PVT1-220ENST00000524165 ACVR2BQ13705 512 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 TMED8Q6PL24 325 aaPredicted RBP21.25■□□□□ 0.99
PVT1-220ENST00000524165 WNT8AQ9H1J5 351 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 CERS4Q9HA82 394 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
PVT1-220ENST00000524165 DNAJC25-GNG10A0A024R161 153 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 CTAGE5O15320 804 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 PFKMP08237 780 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 GNAI3P08754 354 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 CCDC144BQ3MJ40 725 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 SIAH1Q8IUQ4 282 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 VWCEQ96DN2 955 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 ABHD16BQ9H3Z7 469 aa21.24■□□□□ 0.99
PVT1-220ENST00000524165 CABYRO75952 493 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 ALADP13716 330 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 GJD3Q8N144 294 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 REPS2Q8NFH8 660 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 DDX11Q96FC9 970 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 UIMC1Q96RL1 719 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 DBNDD2Q9BQY9 259 aa21.23■□□□□ 0.99
PVT1-220ENST00000524165 API5Q9BZZ5 524 aaKnown RBP21.23■□□□□ 0.99
PVT1-220ENST00000524165 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.23■□□□□ 0.99
PVT1-220ENST00000524165 COL4A4P53420 1690 aaPredicted RBP21.22■□□□□ 0.99
PVT1-220ENST00000524165 IDH1O75874 414 aaKnown RBP21.22■□□□□ 0.99
PVT1-220ENST00000524165 CSPP1Q1MSJ5 1256 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 TNNI3KQ59H18 835 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 FAM178BQ8IXR5 827 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 ARNTL2Q8WYA1 636 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 FBXL18Q96ME1 805 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 PPP1R9AQ9ULJ8 1098 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 FPGT-TNNI3KV9GXZ4 949 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 ZNF318Q5VUA4 2279 aa21.22■□□□□ 0.99
PVT1-220ENST00000524165 TAP1Q03518 808 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 ICA1Q05084 483 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 GRB10Q13322 594 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 ITGA7Q13683 1181 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 FBXO28Q9NVF7 368 aa21.21■□□□□ 0.99
PVT1-220ENST00000524165 NOB1Q9ULX3 412 aaKnown RBP21.21■□□□□ 0.99
PVT1-220ENST00000524165 CXCL17Q6UXB2 119 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 PHOSPHO2Q8TCD6 241 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 AGBL1Q96MI9 1066 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 SLC9A7Q96T83 725 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 RIOK1Q9BRS2 568 aaKnown RBP21.2■□□□□ 0.98
PVT1-220ENST00000524165 LMCD1Q9NZU5 365 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 SCN5AQ14524 2016 aa21.2■□□□□ 0.98
PVT1-220ENST00000524165 E9PSI1 815 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 B4GALT4O60513 344 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 BEX3Q00994 111 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 CLEC10AQ8IUN9 316 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 SCLYQ96I15 445 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 TEX13BQ9BXU2 312 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms