RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 SALL3Q9BXA9 1300 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 RARBP10826 455 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 RTP1P59025 263 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 HDAC1Q13547 482 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 LRRC41Q15345 812 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 LRIT3Q3SXY7 679 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 SLC39A5Q6ZMH5 540 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 KIFC2Q96AC6 838 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 EVI5LQ96CN4 794 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 CNPY2Q9Y2B0 182 aa13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 GREB1LQ9C091 1923 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-237ENST00000523275 PARP14Q460N5 1801 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 BMP3P12645 472 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 TAL1P17542 331 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 GPR153Q6NV75 609 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 SLC38A10Q9HBR0 1119 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
CTNNA1-237ENST00000523275 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 SZT2Q5T011 3432 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 DNAJC25-GNG10A0A024R161 153 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 FDX1P10109 184 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 OAZ1P54368 228 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 PDE1AP54750 535 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 RNF180Q86T96 592 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 FBXO40Q9UH90 709 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 PHF24Q9UPV7 400 aa13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTNNA1-237ENST00000523275 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.18
CTNNA1-237ENST00000523275 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 FRMPD3Q5JV73 1810 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 TMEM232C9JQI7 657 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 FOXP2O15409 715 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 PGK1P00558 417 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 AKR1A1P14550 325 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 CTDSPL2Q05D32 466 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 AAMPQ13685 434 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 SNX17Q15036 470 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 C1orf53Q5VUE5 145 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 TICAM2Q86XR7 235 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 ANKRD35Q8N283 1001 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 GMCL1Q96IK5 515 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
CTNNA1-237ENST00000523275 SYNGAP1Q96PV0 1343 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 SNAI1O95863 264 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 MCCP23508 829 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 SLC1A4P43007 532 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 STAT2P52630 851 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 ALX1Q15699 326 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 IL17RBQ9NRM6 502 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 ANAPC4Q9UJX5 808 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 FAM184BQ9ULE4 1060 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
CTNNA1-237ENST00000523275 ORC4O43929 436 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 RANBP6O60518 1105 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 PLA2G6O60733 806 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 TLE2Q04725 743 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 DEFB123Q8N688 67 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
CTNNA1-237ENST00000523275 SMCHD1A6NHR9 2005 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 NMT2O60551 498 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 FGRP09769 529 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 LENG1Q96BZ8 264 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 FAM227BQ96M60 508 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 TSEN34Q9BSV6 310 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-237ENST00000523275 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms