RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CNTNAP1P78357 1384 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 COL4A5P29400 1685 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 P4HA2O15460 535 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 NEBLO76041 1014 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 MYL1P05976 194 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 RPS12P25398 132 aaKnown RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 INPP5BP32019 993 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 SCNN1DP51172 638 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 PSMD7P51665 324 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 RPS8P62241 208 aaKnown RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 RAPGEF1Q13905 1077 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 WASHC4Q2M389 1173 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 BOLA3Q53S33 107 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 C8orf58Q8NAV2 365 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 PIBF1Q8WXW3 757 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 FAM163AQ96GL9 167 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 C8orf48Q96LL4 319 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 PANK2Q9BZ23 570 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 TANGO6Q9C0B7 1094 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 VCX3BQ9H321 246 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 LUC7LQ9NQ29 371 aaKnown RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 TCF7L2Q9NQB0 619 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 PSD3Q9NYI0 1048 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 CLIC5Q9NZA1 410 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 ZNF69Q9UC07 566 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
HDAC3-216ENST00000523088 PGAP2Q9UHJ9 254 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 ZNF609O15014 1411 aa8.51□□□□□ -1.05
HDAC3-216ENST00000523088 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 H7C1D1 291 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 HOXC13P31276 330 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 KIF5BP33176 963 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 MECOMQ03112 1051 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 TEX19Q8NA77 164 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 GIMAP7Q8NHV1 300 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 TBC1D5Q92609 795 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 DPF2Q92785 391 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 JARID2Q92833 1246 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 RELTQ969Z4 430 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 EXOC4Q96A65 974 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 NEK1Q96PY6 1258 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 FAM167BQ9BTA0 163 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 ZKSCAN5Q9Y2L8 839 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
HDAC3-216ENST00000523088 NOSIPQ9Y314 301 aaKnown RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 V9GYY5 206 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-216ENST00000523088 G3V3G9 751 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CEP104O60308 925 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 TBCAO75347 108 aaKnown RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 RTN3O95197 1032 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 SLC4A2P04920 1241 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 ECE1P42892 770 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 NEK2P51955 445 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CTSWP56202 376 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CXCL9Q07325 125 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 FAM133BQ5BKY9 247 aaKnown RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 DCAF8Q5TAQ9 597 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 MICALCLQ6ZW33 695 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 KIAA1328Q86T90 577 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 SAPCD2Q86UD0 394 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 SMYD1Q8NB12 490 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CELF1Q92879 486 aaKnown RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 TSR2Q969E8 191 aaKnown RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 UROC1Q96N76 676 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CAPS2Q9BXY5 557 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 ZC3H12CQ9C0D7 883 aaKnown RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 SLC7A5P2Q9GIP4 190 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 CCDC68Q9H2F9 335 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-216ENST00000523088 PCDH12Q9NPG4 1184 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 ANKIB1Q9P2G1 1089 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 RABGAP1Q9Y3P9 1069 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 XDHP47989 1333 aa8.49□□□□□ -1.05
HDAC3-216ENST00000523088 DYTNA2CJ06 578 aa8.48□□□□□ -1.05
HDAC3-216ENST00000523088 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
HDAC3-216ENST00000523088 CPLX1O14810 134 aa8.48□□□□□ -1.05
HDAC3-216ENST00000523088 NEMFO60524 1076 aa8.48□□□□□ -1.05
HDAC3-216ENST00000523088 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
HDAC3-216ENST00000523088 POTEJP0CG39 1038 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms