RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 SPICE1Q8N0Z3 855 aa16.35■□□□□ 0.21
EXTL3-211ENST00000522698 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
EXTL3-211ENST00000522698 CTCFLQ8NI51 663 aaPredicted RBP16.35■□□□□ 0.21
EXTL3-211ENST00000522698 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
EXTL3-211ENST00000522698 RBM28Q9NW13 759 aaKnown RBP16.35■□□□□ 0.21
EXTL3-211ENST00000522698 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
EXTL3-211ENST00000522698 A0A0G2JMZ2 1700 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 BMP3P12645 472 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 KIF5BP33176 963 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
EXTL3-211ENST00000522698 SLC1A4P43007 532 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 CUL4AQ13619 759 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
EXTL3-211ENST00000522698 STAG2Q8N3U4 1231 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
EXTL3-211ENST00000522698 NUP88Q99567 741 aaPredicted RBP16.34■□□□□ 0.21
EXTL3-211ENST00000522698 NCOA5Q9HCD5 579 aaKnown RBP16.34■□□□□ 0.21
EXTL3-211ENST00000522698 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
EXTL3-211ENST00000522698 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.2
EXTL3-211ENST00000522698 NTRK3Q16288 839 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 KCTD1Q719H9 257 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 TMOD4Q9NZQ9 345 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
EXTL3-211ENST00000522698 BRCA2P51587 3418 aa16.33■□□□□ 0.2
EXTL3-211ENST00000522698 TESPA1A2RU30 521 aaPredicted RBP16.32■□□□□ 0.2
EXTL3-211ENST00000522698 RAD21O60216 631 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 PLA2G6O60733 806 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 GNAQP50148 359 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 GTF2A2P52657 109 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 SP3Q02447 781 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 FUT2Q10981 343 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 CCDC96Q2M329 555 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 BTNL9Q6UXG8 535 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 BRI3BPQ8WY22 251 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
EXTL3-211ENST00000522698 CNTNAP5Q8WYK1 1306 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 CCL15-CCL14A0A0B4J2E2 113 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 KLRF2D3W0D1 207 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
EXTL3-211ENST00000522698 CETPP11597 493 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 BECN1Q14457 450 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 CCL15Q16663 113 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 TREML2Q5T2D2 321 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
EXTL3-211ENST00000522698 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
EXTL3-211ENST00000522698 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
EXTL3-211ENST00000522698 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
EXTL3-211ENST00000522698 CYTH3O43739 400 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 IFNAR1P17181 557 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
EXTL3-211ENST00000522698 TAF1CQ15572 869 aaPredicted RBP16.3■□□□□ 0.2
EXTL3-211ENST00000522698 GADL1Q6ZQY3 521 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
EXTL3-211ENST00000522698 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 NSUN7Q8NE18 718 aaKnown RBP16.3■□□□□ 0.2
EXTL3-211ENST00000522698 LLPHQ9BRT6 129 aaKnown RBP16.3■□□□□ 0.2
EXTL3-211ENST00000522698 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 CPLX1O14810 134 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 STAT2P52630 851 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 INTS4Q96HW7 963 aaKnown RBP16.29■□□□□ 0.2
EXTL3-211ENST00000522698 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 UBA5Q9GZZ9 404 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 FBXO28Q9NVF7 368 aa16.29■□□□□ 0.2
EXTL3-211ENST00000522698 MYPNQ86TC9 1320 aa16.28■□□□□ 0.2
EXTL3-211ENST00000522698 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms