RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RECQLP46063 649 aaPredicted RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 ALDH5A1P51649 535 aaPredicted RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 AK2P54819 239 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 PCBP2Q15366 365 aaKnown RBP eCLIP4.9□□□□□ -1.62
SKP1-209ENST00000522552 ALDH1L2Q3SY69 923 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 CFAP100Q494V2 611 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 INTS3Q68E01 1043 aaKnown RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 HEATR6Q6AI08 1181 aaKnown RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 IQSEC1Q6DN90 963 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 OVOS1Q6IE37 1185 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 CFAP161Q6P656 301 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 IGF2-ASQ6U949 168 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 GRIN3AQ8TCU5 1115 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 AIFM3Q96NN9 605 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 HHIPQ96QV1 700 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 MYD88Q99836 296 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 LRRC27Q9C0I9 530 aa4.9□□□□□ -1.62
SKP1-209ENST00000522552 POLMQ9NP87 494 aaPredicted RBP4.9□□□□□ -1.62
SKP1-209ENST00000522552 TTLL8A6PVC2 850 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SASH3O75995 380 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ZRANB2O95218 330 aaKnown RBP eCLIP4.89□□□□□ -1.63
SKP1-209ENST00000522552 IGFALSP35858 605 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 CCT5P48643 541 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 USP14P54578 494 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ERVK-21P61565 698 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 RBM10P98175 930 aaKnown RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 GNPTABQ3T906 1256 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 LLGL2Q6P1M3 1020 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 KRT77Q7Z794 578 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 NCAPG2Q86XI2 1143 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 GSTCDQ8NEC7 633 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 STK35Q8TDR2 534 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SCLYQ96I15 445 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SERINC2Q96SA4 455 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SLC9A7Q96T83 725 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 EIF2AK1Q9BQI3 630 aaKnown RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 C11orf16Q9NQ32 467 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SLC45A1Q9Y2W3 748 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 PRR36Q9H6K5 1346 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 PRODHO43272 600 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SPINT1O43278 529 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 FGFR1P11362 822 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 PABPC1P11940 636 aaKnown RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 SLC5A1P13866 664 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 NME1P15531 152 aaKnown RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 NME2P22392 152 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 GRIA2P42262 883 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 PHKA2P46019 1235 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 IREB2P48200 963 aaKnown RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 SCNN1BP51168 640 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 PPP2R3AQ06190 1150 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 TRIM14Q14142 442 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ODF1Q14990 250 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 LRRC14Q15048 493 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ATP13A4Q4VNC1 1196 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 COL13A1Q5TAT6 717 aaPredicted RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 C16orf54Q6UWD8 224 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 NSMFQ6X4W1 530 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 LDHAL6AQ6ZMR3 332 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 RASSF3Q86WH2 238 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 OSBP2Q969R2 916 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ATG4CQ96DT6 458 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ZIC5Q96T25 663 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 GRIP2Q9C0E4 1043 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 BHLHE41Q9C0J9 482 aaPredicted RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 VTA1Q9NP79 307 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 GMIPQ9P107 970 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 DNMT3LQ9UJW3 386 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 ZNF214Q9UL59 606 aaPredicted RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 PTPN22Q9Y2R2 807 aa4.89□□□□□ -1.63
SKP1-209ENST00000522552 SOS2Q07890 1332 aaPredicted RBP4.89□□□□□ -1.63
SKP1-209ENST00000522552 TNFRSF10CO14798 259 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 ZKSCAN1P17029 563 aaPredicted RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 RHCEP18577 417 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 TARSP26639 723 aaKnown RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 CDK8P49336 464 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 EIF5P55010 431 aaKnown RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 RHDQ02161 417 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 SLC9A5Q14940 896 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 SLC27A3Q5K4L6 730 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 CDCA2Q69YH5 1023 aaPredicted RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 NLRC3Q7RTR2 1065 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 KRT25Q7Z3Z0 450 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 CMTR2Q8IYT2 770 aaKnown RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 IL17REQ8NFR9 667 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 HSPBAP1Q96EW2 488 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 TBATAQ96M53 351 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.63
SKP1-209ENST00000522552 ALDH8A1Q9H2A2 487 aaPredicted RBP4.88□□□□□ -1.63
SKP1-209ENST00000522552 CBX8Q9HC52 389 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 FRMD4BQ9Y2L6 1034 aa4.88□□□□□ -1.63
SKP1-209ENST00000522552 A6NCN8 305 aa4.87□□□□□ -1.63
SKP1-209ENST00000522552 SLC22A31A6NKX4 558 aa4.87□□□□□ -1.63
SKP1-209ENST00000522552 A6NNZ2 444 aa4.87□□□□□ -1.63
SKP1-209ENST00000522552 C9IYK1 514 aa4.87□□□□□ -1.63
SKP1-209ENST00000522552 NFKBIEO00221 500 aa4.87□□□□□ -1.63
SKP1-209ENST00000522552 WIPF1O43516 503 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms