RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 SENP2Q9HC62 589 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 MORF4L1Q9UBU8 362 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 MAD2L2Q9UI95 211 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 RABGAP1Q9Y3P9 1069 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 RBBP6Q7Z6E9 1792 aaKnown RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TMEM232C9JQI7 657 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 KLRF2D3W0D1 207 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 AOC2O75106 756 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZBED4O75132 1171 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 FLOT1O75955 427 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 CDKL5O76039 1030 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 BCRP11274 1271 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 METAP2P50579 478 aaKnown RBP eCLIP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 HERVK_113P62684 666 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCNA1P78396 465 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 MKRN3Q13064 507 aaKnown RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TAF1CQ15572 869 aaPredicted RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZYXQ15942 572 aaKnown RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 RTN1Q16799 776 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 FAM110CQ1W6H9 321 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SYDE2Q5VT97 1194 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 CPLX2Q6PUV4 134 aaKnown RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 C17orf99Q6UX52 265 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TMTC3Q6ZXV5 915 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SAMD3Q8N6K7 520 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SHCBP1Q8NEM2 672 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TCEANC2Q96MN5 208 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZIC5Q96T25 663 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 RNF26Q9BY78 433 aaPredicted RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TANGO6Q9C0B7 1094 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 GPHNQ9NQX3 736 aaPredicted RBP7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 TPCN1Q9ULQ1 816 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNF236Q9UL36 1845 aa7.4□□□□□ -1.23
IGHV4-55-201ENST00000520889 BAZ2BQ9UIF8 2168 aaKnown RBP7.4□□□□□ -1.23
IGHV4-55-201ENST00000520889 CASP8AP2Q9UKL3 1982 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 GOLGA8AA7E2F4 631 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 GOLGA8BA8MQT2 603 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 VWA5AO00534 786 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 SLC25A27O95847 323 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 GNRH1P01148 92 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 IFNAR1P17181 557 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 HTRA3P83110 453 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 NTRK3Q16288 839 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 KCTD1Q719H9 257 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 REPS2Q8NFH8 660 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 SMCR8Q8TEV9 937 aaPredicted RBP7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 NUP133Q8WUM0 1156 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 GTF3C6Q969F1 213 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 LLPHQ9BRT6 129 aaKnown RBP7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 SLKQ9H2G2 1235 aaPredicted RBP7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 FAM217BQ9NTX9 383 aaPredicted RBP7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 RNF186Q9NXI6 227 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 SMCHD1A6NHR9 2005 aa7.39□□□□□ -1.23
IGHV4-55-201ENST00000520889 STK36Q9NRP7 1315 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 PNMA6FA0A0J9YX94 578 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 CPLX1O14810 134 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ZBTB5O15062 677 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 PRPF3O43395 683 aaKnown RBP7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 STRNO43815 780 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 RAD21O60216 631 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ICAM1P05362 532 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 HOXD11P31277 338 aaPredicted RBP7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 GHRHRQ02643 423 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 FUT2Q10981 343 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 GRM1Q13255 1194 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 CRHR2Q13324 411 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 DGKZQ13574 1117 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ARHGEF6Q15052 776 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 CDC37Q16543 378 aaPredicted RBP7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ME3Q16798 604 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 RIOX2Q8IUF8 465 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 TRIM22Q8IYM9 498 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ADGRF4Q8IZF3 695 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 CHST13Q8NET6 341 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 GPRC5AQ8NFJ5 357 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 ATG4CQ96DT6 458 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 NUP88Q99567 741 aaPredicted RBP7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 MYL10Q9BUA6 226 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 AMNQ9BXJ7 453 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 TEX13BQ9BXU2 312 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 MROH8Q9H579 483 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 JMJD4Q9H9V9 463 aa7.38□□□□□ -1.23
IGHV4-55-201ENST00000520889 RBPJLQ9UBG7 517 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms