RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ACLYP53396 1101 aa18.24■□□□□ 0.51
CSGALNACT1-204ENST00000517494 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSGALNACT1-204ENST00000517494 FAM184BQ9ULE4 1060 aa18.24■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
CSGALNACT1-204ENST00000517494 SYNRGQ9UMZ2 1314 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 KIAA0355O15063 1070 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ADAMTS4O75173 837 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 NDUFB10O96000 172 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 RIPK3Q9Y572 518 aa18.23■□□□□ 0.51
CSGALNACT1-204ENST00000517494 COL11A1P12107 1806 aaPredicted RBP18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 F5H6K3 240 aa18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ZBED4O75132 1171 aa18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 RASA1P20936 1047 aa18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 KLRC3Q07444 240 aa18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 RAVER2Q9HCJ3 691 aaKnown RBP18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
CSGALNACT1-204ENST00000517494 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 SNAI1O95863 264 aaPredicted RBP18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 TDO2P48775 406 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 FAAP100Q0VG06 881 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 KCNA10Q16322 511 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 PRPF38AQ8NAV1 312 aaKnown RBP18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 TSEN34Q9BSV6 310 aaKnown RBP18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 VCANP13611 3396 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 SYNGAP1Q96PV0 1343 aa18.21■□□□□ 0.51
CSGALNACT1-204ENST00000517494 CDH23Q9H251 3354 aa18.21■□□□□ 0.5
CSGALNACT1-204ENST00000517494 MOXD2PA6NHM9 499 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 PRDM1O75626 825 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 APPP05067 770 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TSHZ3Q63HK5 1081 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ANKRD33Q7Z3H0 272 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GLT1D1Q96MS3 346 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 HOMER2Q9NSB8 354 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 DNAJB2P25686 324 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ZNF444Q8N0Y2 327 aaPredicted RBP18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TOX2Q96NM4 488 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 SPC25Q9HBM1 224 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TMEM265A0A087WTH1 108 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 DUSP11O75319 330 aaKnown RBP18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 MAMDC4Q6UXC1 1216 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 APPBP2Q92624 585 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
CSGALNACT1-204ENST00000517494 DNAJC25-GNG10A0A024R161 153 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GPAA1O43292 621 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TIMP1P01033 207 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ASGR1P07306 291 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ARMCX2Q7L311 632 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TIFAQ96CG3 184 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CEP95Q96GE4 821 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 PPP1R12CQ9BZL4 782 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ZNF287Q9HBT7 754 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 FEM1BQ9UK73 627 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 PLXNA1Q9UIW2 1896 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 MROH7Q68CQ1 1323 aa18.17■□□□□ 0.5
CSGALNACT1-204ENST00000517494 RNF113AO15541 343 aaKnown RBP18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ADCY6O43306 1168 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 CCSAPQ6IQ19 270 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 GIMAP6Q6P9H5 292 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ZNF467Q7Z7K2 595 aaPredicted RBP18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 SLC38A10Q9HBR0 1119 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 FBXO40Q9UH90 709 aa18.16■□□□□ 0.5
CSGALNACT1-204ENST00000517494 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms