RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 STX10O60499 249 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 CNNM4Q6P4Q7 775 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC63Q8NA47 563 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 KIFAP3Q92845 792 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 PRKAG2Q9UGJ0 569 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 NARFQ9UHQ1 456 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 DNM3Q9UQ16 869 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 A0A1B0GVL5 298 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 CCDC169A6NNP5 214 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 RNF40O75150 1001 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 TRPC3Q13507 836 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 GLG1Q92896 1179 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 HAUS2Q9NVX0 235 aa13.52□□□□□ -0.24
PCDHGA6-201ENST00000517434 USP17L12C9JPN9 530 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP17L21D6R901 530 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 BRD1O95696 1058 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 PSMC4P43686 418 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 GYG1P46976 350 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 KRT71Q3SY84 523 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 BEND3Q5T5X7 828 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 KLHDC4Q8TBB5 520 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 KIFC2Q96AC6 838 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 PRDM1O75626 825 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 ATP2A2P16615 1042 aaKnown RBP13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 LRMPQ12912 555 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 RSPH3Q86UC2 560 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 PIGBQ92521 554 aa13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 N4BP2L2Q92802 583 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA6-201ENST00000517434 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 TXNDC9O14530 226 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 BIRC3Q13489 604 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 SGSM2O43147 1006 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 POLR2MP0CAP2 368 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 PDE6AP16499 860 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 ERCC3P19447 782 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 MRFAP1L1Q96HT8 127 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 CLTAP09496 248 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 TMOD1P28289 359 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 APBA1Q02410 837 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 VPS72Q15906 364 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 ABT1Q9ULW3 272 aaKnown RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 STK38LQ9Y2H1 464 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 SLC27A2O14975 620 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 ARHGEF16Q5VV41 709 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 DPP9Q86TI2 863 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 EXOC8Q8IYI6 725 aa13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
PCDHGA6-201ENST00000517434 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 YWHAEP62258 255 aaKnown RBP13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 IRX4P78413 519 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 ARID5AQ03989 594 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 NUF2Q9BZD4 464 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 AP5M1Q9H0R1 490 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 FAM204AQ9H8W3 233 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 FLOT1O75955 427 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 PDE4DQ08499 809 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 PKD2L1Q9P0L9 805 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 PYCARDQ9ULZ3 195 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 P4HA1P13674 534 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 NLRP12P59046 1061 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 COG7P83436 770 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 HSP90AA5PQ58FG0 334 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 LEO1Q8WVC0 666 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 USP44Q9H0E7 712 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
PCDHGA6-201ENST00000517434 PPFIA2O75334 1257 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms