RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 ZNF865P0CJ78 1059 aaPredicted RBP28.68■■■□□ 2.18
CCND3-221ENST00000514588 SYNPO2Q9UMS6 1093 aa28.68■■■□□ 2.18
CCND3-221ENST00000514588 PHF24Q9UPV7 400 aa28.68■■■□□ 2.18
CCND3-221ENST00000514588 SMCHD1A6NHR9 2005 aa28.68■■■□□ 2.18
CCND3-221ENST00000514588 PLIN4Q96Q06 1357 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 TTLL1O95922 423 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 MX1P20591 662 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 CPXCR1Q8N123 301 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 LRRC47Q8N1G4 583 aaKnown RBP28.67■■■□□ 2.18
CCND3-221ENST00000514588 GMCL1P1Q8NEA9 526 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 NEDD1Q8NHV4 660 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 KIFC2Q96AC6 838 aa28.67■■■□□ 2.18
CCND3-221ENST00000514588 DNAJC25-GNG10A0A024R161 153 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 ZBED4O75132 1171 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 PGK1P00558 417 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 NAPBQ9H115 298 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 SLC38A10Q9HBR0 1119 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 FEM1BQ9UK73 627 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 CNPY2Q9Y2B0 182 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 MYH4Q9Y623 1939 aa28.66■■■□□ 2.18
CCND3-221ENST00000514588 LTBP2Q14767 1821 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 TSPY3P0CV98 308 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 TSPY8P0CW00 308 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 AKR1A1P14550 325 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 SLC4A3P48751 1232 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 PDE4BQ07343 736 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 PPARAQ07869 468 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 C1orf53Q5VUE5 145 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 MSL3Q8N5Y2 521 aaKnown RBP28.65■■■□□ 2.18
CCND3-221ENST00000514588 LENG1Q96BZ8 264 aaPredicted RBP28.65■■■□□ 2.18
CCND3-221ENST00000514588 DDX11Q96FC9 970 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 RAVER2Q9HCJ3 691 aaKnown RBP28.65■■■□□ 2.18
CCND3-221ENST00000514588 PRDM5Q9NQX1 630 aaPredicted RBP28.65■■■□□ 2.18
CCND3-221ENST00000514588 MTMR10Q9NXD2 777 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 SALL3Q9BXA9 1300 aa28.65■■■□□ 2.18
CCND3-221ENST00000514588 RNF180Q86T96 592 aa28.64■■■□□ 2.18
CCND3-221ENST00000514588 PDLIM7Q9NR12 457 aa28.64■■■□□ 2.18
CCND3-221ENST00000514588 CTDP1Q9Y5B0 961 aaPredicted RBP28.64■■■□□ 2.18
CCND3-221ENST00000514588 FOXP2O15409 715 aa28.63■■■□□ 2.17
CCND3-221ENST00000514588 SNAI1O95863 264 aaPredicted RBP28.63■■■□□ 2.17
CCND3-221ENST00000514588 SLC3A2P08195 630 aaKnown RBP28.63■■■□□ 2.17
CCND3-221ENST00000514588 RRP1P56182 461 aaKnown RBP28.63■■■□□ 2.17
CCND3-221ENST00000514588 TFAP4Q01664 338 aa28.63■■■□□ 2.17
CCND3-221ENST00000514588 SLFN13Q68D06 897 aa28.63■■■□□ 2.17
CCND3-221ENST00000514588 MAMDC4Q6UXC1 1216 aa28.63■■■□□ 2.17
CCND3-221ENST00000514588 SYNGAP1Q96PV0 1343 aa28.63■■■□□ 2.17
CCND3-221ENST00000514588 TLE2Q04725 743 aa28.62■■■□□ 2.17
CCND3-221ENST00000514588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.62■■■□□ 2.17
CCND3-221ENST00000514588 SH3RF1Q7Z6J0 888 aa28.62■■■□□ 2.17
CCND3-221ENST00000514588 SLC17A8Q8NDX2 589 aa28.62■■■□□ 2.17
CCND3-221ENST00000514588 COL6A3P12111 3177 aa28.61■■■□□ 2.17
CCND3-221ENST00000514588 ADAMTS4O75173 837 aa28.61■■■□□ 2.17
CCND3-221ENST00000514588 BMP3P12645 472 aa28.61■■■□□ 2.17
CCND3-221ENST00000514588 CCDC129Q6ZRS4 1044 aa28.61■■■□□ 2.17
CCND3-221ENST00000514588 TRIM43BA6NCK2 446 aa28.6■■■□□ 2.17
CCND3-221ENST00000514588 OAZ1P54368 228 aa28.6■■■□□ 2.17
CCND3-221ENST00000514588 ZNF467Q7Z7K2 595 aaPredicted RBP28.6■■■□□ 2.17
CCND3-221ENST00000514588 BADQ92934 168 aa28.6■■■□□ 2.17
CCND3-221ENST00000514588 TRIM43Q96BQ3 446 aaPredicted RBP28.6■■■□□ 2.17
CCND3-221ENST00000514588 FBXO40Q9UH90 709 aa28.6■■■□□ 2.17
CCND3-221ENST00000514588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.6■■■□□ 2.17
CCND3-221ENST00000514588 A0A1W2PQ45 241 aaPredicted RBP28.59■■■□□ 2.17
CCND3-221ENST00000514588 A0A1W2PQY0 241 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 TMEM232C9JQI7 657 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 ANKRD45Q5TZF3 282 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 ANKRD35Q8N283 1001 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 CHST13Q8NET6 341 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 FGD4Q96M96 766 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 FAM184BQ9ULE4 1060 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 STXBP5LQ9Y2K9 1186 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 SYNRGQ9UMZ2 1314 aa28.59■■■□□ 2.17
CCND3-221ENST00000514588 POTEB2H3BUK9 544 aa28.58■■■□□ 2.17
CCND3-221ENST00000514588 SHHQ15465 462 aa28.58■■■□□ 2.17
CCND3-221ENST00000514588 GMCL1Q96IK5 515 aa28.58■■■□□ 2.17
CCND3-221ENST00000514588 INCENPQ9NQS7 918 aa28.58■■■□□ 2.17
CCND3-221ENST00000514588 ZHX1Q9UKY1 873 aaPredicted RBP28.58■■■□□ 2.17
CCND3-221ENST00000514588 FDX1P10109 184 aa28.57■■■□□ 2.16
CCND3-221ENST00000514588 STAT2P52630 851 aa28.57■■■□□ 2.16
CCND3-221ENST00000514588 CTDSPL2Q05D32 466 aa28.57■■■□□ 2.16
CCND3-221ENST00000514588 C9orf50Q5SZB4 431 aa28.57■■■□□ 2.16
CCND3-221ENST00000514588 FAM109BQ6ICB4 259 aaPredicted RBP28.57■■■□□ 2.16
CCND3-221ENST00000514588 CRBNQ96SW2 442 aa28.57■■■□□ 2.16
CCND3-221ENST00000514588 TSEN34Q9BSV6 310 aaKnown RBP28.57■■■□□ 2.16
CCND3-221ENST00000514588 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.57■■■□□ 2.16
CCND3-221ENST00000514588 ISY1Q9ULR0 285 aaKnown RBP28.57■■■□□ 2.16
CCND3-221ENST00000514588 ACVR2BQ13705 512 aa28.56■■■□□ 2.16
CCND3-221ENST00000514588 VPS53Q5VIR6 699 aa28.56■■■□□ 2.16
CCND3-221ENST00000514588 KLHDC9Q8NEP7 349 aa28.56■■■□□ 2.16
CCND3-221ENST00000514588 CHMP4CQ96CF2 233 aa28.56■■■□□ 2.16
CCND3-221ENST00000514588 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
CCND3-221ENST00000514588 TACC3Q9Y6A5 838 aa28.56■■■□□ 2.16
CCND3-221ENST00000514588 MCCP23508 829 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 ITGB8P26012 769 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 SLC1A4P43007 532 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 ACLYP53396 1101 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 PPP4R3BQ5MIZ7 849 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 FAM160B2Q86V87 743 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 CHURC1Q8WUH1 139 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 STAG1Q8WVM7 1258 aa28.55■■■□□ 2.16
CCND3-221ENST00000514588 EVI5LQ96CN4 794 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms