RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 GNAQP50148 359 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 RASSF7Q02833 373 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 NFIAQ12857 509 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 STK3Q13188 491 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 PICALMQ13492 652 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 RTN1Q16799 776 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 ATL3Q6DD88 541 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 TRIM22Q8IYM9 498 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 LZTS2Q9BRK4 669 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
NR1I3-230ENST00000511944 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
NR1I3-230ENST00000511944 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-230ENST00000511944 WNT10BO00744 389 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 PRDM1O75626 825 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
NR1I3-230ENST00000511944 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 NTRK3Q16288 839 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-230ENST00000511944 TSC1Q92574 1164 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 EMID1Q96A84 441 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-230ENST00000511944 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 TDRD3Q9H7E2 651 aaKnown RBP10.57□□□□□ -0.72
NR1I3-230ENST00000511944 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 PPP2R3BQ9Y5P8 575 aa10.57□□□□□ -0.72
NR1I3-230ENST00000511944 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 DEXIO95424 95 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 F13A1P00488 732 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 MCM4P33991 863 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 SHMT1P34896 483 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 GMPSP49915 693 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-230ENST00000511944 PRELPP51888 382 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 DESI1Q6ICB0 168 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-230ENST00000511944 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
NR1I3-230ENST00000511944 IL17RBQ9NRM6 502 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-230ENST00000511944 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
NR1I3-230ENST00000511944 CNTNAP1P78357 1384 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 H7C1D1 291 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 JAK2O60674 1132 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 AP1G2O75843 785 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 TTLL1O95922 423 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 CDC27P30260 824 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 LYPD8Q6UX82 237 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 NYAP2Q9P242 653 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 CNOT7Q9UIV1 285 aaKnown RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
NR1I3-230ENST00000511944 SIPA1L1O43166 1804 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 ZNF541Q9H0D2 1346 aa10.55□□□□□ -0.72
NR1I3-230ENST00000511944 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 H3BQV1 296 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SNHG28P0DPA3 235 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 FDPSP14324 419 aaKnown RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 XBP1P17861 261 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 ADD1P35611 737 aaKnown RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 PKP1Q13835 747 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 GRM4Q14833 912 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 KIF4BQ2VIQ3 1234 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 CERKLQ49MI3 558 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-230ENST00000511944 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
NR1I3-230ENST00000511944 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms